Citrobacter sp. LUTT5: GUC46_19305
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Entry
GUC46_19305 CDS
T10487
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
citr Citrobacter sp. LUTT5
Pathway
citr03030
DNA replication
citr03430
Mismatch repair
citr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GUC46_19305 (dnaE)
03430 Mismatch repair
GUC46_19305 (dnaE)
03440 Homologous recombination
GUC46_19305 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
citr03032
]
GUC46_19305 (dnaE)
03400 DNA repair and recombination proteins [BR:
citr03400
]
GUC46_19305 (dnaE)
Enzymes [BR:
citr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GUC46_19305 (dnaE)
DNA replication proteins [BR:
citr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GUC46_19305 (dnaE)
DNA repair and recombination proteins [BR:
citr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GUC46_19305 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QHI84341
LinkDB
All DBs
Position
complement(3999082..4002564)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVRSELLGDELTQLTVLAANNTGYQNLTLLISKAYQRGYGAEGPVIDRDW
LVELKEGLILLSGGRMGDVGRSLLRGNNALVDECVAFYEEHFPNCYFLELIRTGRQDEEN
YLHAAVALAETRGLPVVATNDVRFLETGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEDEMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVAKSREGL
EERLEFLFPDPEVRAQKRPPYDERLEVELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWAQEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKRGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNEGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLNDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacgtttcgtccacctacgggtgcacagcgactactccatgatcgatggg
ctggcgaaaaccggaccgctggtaaaaaaggcggccgcgttaggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggtctggtgaagttttacggagcgggccatggcgcg
ggtatcaagccgatagttggcgcagattttcatgtccgcagtgagctgttgggcgatgaa
ctcacgcagcttaccgtgctggccgcaaataataccggctatcagaacctgacgttgttg
atttcgaaagcctatcagcgcggctatggcgcagaaggaccggttatcgaccgggactgg
ttggtcgagttaaaagaaggcttgattttgctctctggcggtcgcatgggcgatgtcgga
cgaagtctgctgcgcggcaataacgcactggttgacgagtgcgtggcgttttacgaagaa
cattttcccaattgctatttcctcgaactgattcgcaccggcaggcaagatgaagaaaat
tatctgcacgcagccgtagcactggccgaaacgcgtggcctaccggtggtggcgactaac
gatgtccgcttccttgaaaccggagatttcgatgcgcatgaaatccgcgtagcgatccac
gacggctttacccttgatgacccgaaacgcccgcgtaactattcgccgcagcagtacatg
cgcagcgaagatgagatgtgcgagctgttctccgatattccggaagcactgcaaaacacc
gtcgagatagctaaacgctgcaacgtgacggtgcgtctgggcgaatatttcctgccgcag
ttcccgaccggcgatatgaccaccgaagatttccttgtggcgaaatcacgcgaagggctg
gaagaacgtctcgaatttttgttccctgaccctgaagttcgtgcgcagaagcgcccacct
tacgatgaacgtctggaagttgaacttaaagttatcaaccagatgggattcccgggctac
ttcctgatcgttatggaatttatccagtggtcgaaagataacggcgtaccggtaggcccg
ggacgtggttccggtgctggctcacttgttgcctatgcgctgaaaattaccgatctcgac
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtctcaatgccc
gacttcgacgttgacttctgtatggagaaacgcgaccaggtcatcgagcacgtggcggaa
atgtacggtcgtgatgcggtttcgcagattattaccttcggtacgatggctgcaaaagcg
gttatccgcgacgtgggccgcgtactggggcatccgtacggcttcgttgaccgtatttcg
aagctggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagccgaaccccaa
ctgccggaaatttatgaggcagatgaagaggttaaagcgctgatcgatatggcgcgtaag
ctggaaggcgtcacgcgtaacgccggtaagcacgccggtggtgtggttatcgcaccgacc
aaaattactgattttgctccgctgtactgcgatgaacaggggctgcacccggttactcag
tttgataagaacgatgtggaatatgccggtcttgtgaagttcgacttcctcggcctgcgt
acgctcaccatcatcaactgggcgcaggaaatgatcaacgcgcgccgtgaaaagaacggt
gagccaccgctggatattgcggctatcccgctggatgacaagaaaagcttcgatatgctg
caacgctcggagaccacggcggtcttccagcttgaatcccgtggcatgaaagacctgatc
aaacgtctgcagcctgactgcttcgaagatatgatcgcactggtggctctgttccgccct
ggcccgctacagtcggggatggtagataactttatcgaccgtaagcatggtcgcgaagag
atttcctatccggatgtacaatggcagcatgagtgtctgaaaccggtactggagcccacc
tacggcattatcctgtatcaggaacaggttatgcagattgcccaggagttgtccgggtat
acccttggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagaaatg
gccaagcagcgcggcacctttgaagaaggggcgaaaaagcgcggcgtagacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacggatttaacaaatcgcac
tccgctgcctatgcgctggtttcttaccagactctgtggttgaaggcgcattatcctgcc
gagtttatggcggcggtaatgaccgccgatatggataacaccgagaaagtcgtcggactg
gtggatgaatgctggcgcatggggctcaaaatcctgccgccggatatcaactccgggctt
taccattttcacgtgaatgatgatggcgagattgtttatggcatcggcgcgataaaaggc
gtgggtgaagggccaattgaagctattattgaggcgcgtaacgaaggcggctacttccgt
gagctgtttgatctctgcgcgcgcacggatatcaaaaaacttaaccgccgggtgctggaa
aagctaatcatgtccggggcgtttgatcgccttggcccgcatcgtgcagcgttgatgaat
tcgctcaacgacgcactaaaagccgccgatcagcatgcaaaagccgaagctattggtcag
gccgatatgtttggcgtgctggcggaagaaccggagcaaattgaacaatcctatgccagc
tgccaaccgtggccggagcaggtggtattagacggtgagcgtgaaacgttggggctttac
ctgacgggacaccccatcaaccagtatttaaaagaaattgagcgctatgtcggaggctac
aggctgaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtc
attgctgcgcgggtaatggtcaccaagcgcggcaatcgtatcggcatctgtacactggat
gaccgttccggacgtctggaggttatgttgtttaccgatgctctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggcgggcttaaaatgatggcccgtgaagtcatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgttttggcgcgacgtggcgtgtctctccgagcgat
cgtttgctaaacgatctccgtggccttattggttcggagcaggtggaactggagtttgac
taa
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