Citrobacter sp. LUTT5: GUC46_19520
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Entry
GUC46_19520 CDS
T10487
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
citr Citrobacter sp. LUTT5
Pathway
citr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC46_19520 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
citr03019
]
GUC46_19520 (pcnB)
Enzymes [BR:
citr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GUC46_19520 (pcnB)
Messenger RNA biogenesis [BR:
citr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GUC46_19520 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
DUF6932
Motif
Other DBs
NCBI-ProteinID:
QHI84382
LinkDB
All DBs
Position
4052753..4054171
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AA seq
472 aa
AA seq
DB search
MTLPRCTIFTRVANFCRKVLSREEREAELAVARPHMTVIPREQHSISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSEADRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLEEGIIRLIGNPETRYREDPVRMLRAVRFAAKLDMRISPETAEPIPR
LATLLNDIPPARLFEEALKLLQAGYGYETYKKLREYSLFQPLFPTITRYFTEDGDSPMER
IIAQVLKNTDNRINNDMRVNPAFLFAAMFWYPLLEAAQKIAQESGLAYYDAFALAMNDVL
DEACRSLAIPKRLTSLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLALRAEVEHN
AELQRLAKWWGEFQVSAPPEQKGMLNELDEEPDVRRRHRRPRKRAPRREGSA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgcactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggagcgcgaggctgagctcgccgtcgcccgtccacatatgacggtaattccg
cgtgagcagcactctatctcccgcaaagatatcagtgaaaatgccctgaaggtaatgtac
aggctcaataaggccggatacgaggcatggctggttggcggtggtgtacgcgatcttttg
ctgggcaaaaagccgaaagattttgatgtcactactaacgcaacgccggatcaggtgcgt
aaactgtttcgtaactgtcgcctggtcggtcgccgtttccgtctggctcatgtcatgttc
ggtccagaaattatcgaagtggcgacgttccgcggccatcatgaaggcagcgaagccgat
cgtaccacgtcgcaacgcgggcaaaacggtatgttgctgcgcgacaacatcttcggctcc
attgaagaagatgcccaacgtcgcgatttcacgataaacagcctgtattacagcgtggcc
gatttcaccgtgcgtgattacgtcggcggtatgcaggacctcgaagagggcatcattcgc
ctgatcggtaatccggaaacgcgctatcgcgaagatcccgtgcgtatgctgcgcgccgtg
cgctttgccgccaagctcgacatgcgtatcagcccggaaaccgcagagccgatcccgcgt
ctggcaacgctgctgaacgacattcctcctgcacgcctgtttgaagaagcacttaagctg
ttacaggcgggctatgggtatgaaacctataaaaaactgcgtgagtacagcctgttccag
ccgctgttcccaaccattacacgctacttcaccgaagacggtgacagcccgatggaacgc
attatcgctcaggtgctgaagaataccgataaccgcattaacaatgatatgcgcgttaac
ccggcgttcttgtttgccgcgatgttctggtatccgttactggaagccgcgcagaaaatt
gcgcaagaaagcggtttggcctactacgacgctttcgcgctggcaatgaacgacgtgctg
gacgaagcctgccgctcgctggcgatcccgaaacgtctgacctcgctaacccgcgatatc
tggcagttgcaattacgtatgtcccgtcgtcagggtaaacgcgcctggaagctgatggaa
catccaaagttccgcgcagcttatgacctgttagcactgcgtgccgaagtagaacacaac
gctgaactgcaacgactggcgaaatggtggggtgaattccaggtttccgcgccgccggaa
caaaaaggcatgctgaacgaactggatgaagagcctgacgtacgccgtcgccatcgccgc
ccgcgtaagcgtgcgccgcgtcgcgaaggtagcgcgtga
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