Citrobacter sp. LUTT5: GUC46_20015
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Entry
GUC46_20015 CDS
T10487
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
citr Citrobacter sp. LUTT5
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
citr03021
]
GUC46_20015 (rapA)
Transcription machinery [BR:
citr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GUC46_20015 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
QHI84474
LinkDB
All DBs
Position
4166125..4169031
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVMLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLVICSLDFARRSKQRLEHLCDAEWDLLIVDEAHHLVWSEDAPSREYMAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPSRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNSELNMLGDMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGYLAEPENT
DGFDDLIKTCREQHDALKAQLEQGRDRLLEIHSNGGEKALALAESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEKSAR
ALIDAARKEADEKLTAELSRLEALRAVNPNIRDDELSAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttggt
accgttgtcgccatggatgcgcgaaccgtcacattacttttctcatcgacgggcgaaaac
cgtctgtatgcgcgcagtgattcccccgtgacccgcgtgatgttcaatccaggcgatacg
ataacaagccatgaaggctggcaactgcatgtcgatgaagtaaaagaagaaaacggcctg
cttgcctatatcggaacccgcctggataccgaagaaaccggtgtcatgctgcgtgaagta
ctactcgacagcaaactggtattcagcaaaccacaagatcgcctgtttgccggccagatt
gaccgcatggatcgctttgctctgcgctatcgcgcgcgtaaatttcagagcgaacaatac
cgtatgccgtggagtggtttgcgtggtcaacgtaccagcctgattcctcaccagctgaac
attgcccatgatgttggccgtcgtcatgcccctcgcgttttactggcagacgaagtgggt
ttaggtaaaaccattgaagccggtatgatcctgcatcaacagctgctgtcaggcgccgca
gagcgcgtgctgatcatcgtgccggagacattacagcaccagtggctggtcgaaatgctg
cgtcgcttcaacctgcgttttgcactgtttgatgatgagcgttatgcagaagcgcagcac
gacgcctacaacccgtttgaaaccgaacaactggtcatctgctcgctggactttgcccgt
cgcagtaaacagcgcctggagcatctgtgtgacgccgaatgggatctgctgatcgtcgat
gaagcgcatcacctggtgtggagcgaagacgcgcccagccgcgaatatatggccattgaa
caactggcagaacgtgtgccgggcatcctgctgctaaccgctacaccggagcaactgggc
atggaaagtcactttgctcgtctgcgcctgctggaccccagccgtttccacgatttcgcc
cagtttgttgaagagcaaaaaaattatcgtccggtcgccgacgccgtcgctatgttactg
gcaggcaacaagctgagtaatagtgagctgaacatgttaggcgacatgattggcgagcag
gacattgaaccgctattgcaggcggcaaacagcgacagcgaagatgcccagagcgcgcgt
caggagctggtttcgatgctgatggaccgccatggcaccagccgcgtgctgttccgtaac
acccgtaatggtgtgaaaggcttcccaaaacgcgagctgcacaccatcaagctgccgctg
ccgacccaataccagacggcgattaaagtctccggcattatgggtgcgcgtaaaagcgcg
gaagaccgggcgcgcgatatgctctacccggaacagatttatcaggaattcgaaggcgat
accggcacctggtggaactttgacccgcgcgtggaatggctaatgggctatctgaccagc
caccgctcgcaaaaagtattagttatctgtgcaaaagccaccaccgcgcttcaactggag
caggtcctgcgcgagcgagaaggtatccgcgctgccgtgttccatgaagggatgtcgatc
attgagcgtgaccgcgccgcagcctggtttagcgaagaagatagcggcgctcaggtaatg
ctgtgttctgaaatcggctccgaagggcgtaacttccagttcgccagcaatctggtgatg
tttgacctgccgttcaacccggacctgctggaacagcgtattggccgtctggaccgtatt
ggtcaggcacatgatattcagatccacgtcccgtacctggaaaaaaccgcgcaatctgtc
ctggtgcgctggtaccacgaaggtctggatgcgttcgaacacacctgcccgaccggccgt
accatctacgacacggtctataacaatctgatcggctacctggctgaaccagaaaatacc
gatggctttgacgatctgatcaaaacctgtcgcgaacaacatgacgcgctgaaagctcag
ctggagcaaggtcgcgatcgtctgctggagatccattctaacggcggtgaaaaagcgctg
gcactggctgagagtattgaagaacaggacgatgataccagcctgatcgccttcgccatg
aacctgtttgatatcgttggtattaatcaggatgaccgtggtgacaatttgatcgtgctg
acaccgtccgatcatatgctggtgccagatttccctggattgccggaagatggctgcacc
attacgtttgagcgtgatgtcgctctgtcgcgtgaagacgctcagtttattacctgggag
catccgttaattcgtaatggtctggatcttatcctctctggcgacaccggcagcagcacc
atttcgttgttgaaaaacaaagcattaccggtcggaacgctgttggttgagctggtgtat
gtggttgaagcgcaagcgccgaaacagctgcagctgaaccgcttcctgccgccaacgccg
gtacgtatgctgctggataaaaacggcaataacctcgctgcacaggttgagttcgaaacc
tttaaccgtcagctcagcgccgttaaccgccacaccggcagtaaactggtcaacgccgtg
cagcaggacgtacatgctattctgcaactcggtgaagcacaggtggaaaaatcagcccgc
gcgctgatcgacgcggcgcgtaaagaagcggacgaaaaactgactgcggaactctcccgt
ctggaagcgctgcgtgccgttaacccgaacatccgtgatgacgaactcagcgcaattgaa
agcaaccgtcagcaggtgatggaaagcctggatcaggcgggctggcgtctggatgccctg
cgcctgatcgtcgtgacgcatcagtaa
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