Citrobacter tructae: E4Z61_00960
Help
Entry
E4Z61_00960 CDS
T07250
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
citz
Citrobacter tructae
Pathway
citz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4Z61_00960 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
citz03019
]
E4Z61_00960 (rhlE)
Enzymes [BR:
citz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E4Z61_00960 (rhlE)
Messenger RNA biogenesis [BR:
citz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4Z61_00960 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Cullin_binding
Motif
Other DBs
NCBI-ProteinID:
QBX78999
UniProt:
A0ABX5T0Y9
LinkDB
All DBs
Position
68755..70098
Genome browser
AA seq
447 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHAPHGKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQFVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
EKLLKKEIPRIAVDGYAPDPSIKAEPIQNGRQQRGGGGRGQGGAGRGQQPRRQDGGAPKA
KPRSSEGKPAGDKPRPPRRPRRPSSAQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggtttaaaccctgatatcttgcgcgctgttgccgagcagggt
taccgtgaacctacccctattcagcagcaggctatccctgcggtgctggaaggccgcgat
ctgatggcgagcgcccagaccggtacgggtaaaacggcaggttttaccctgccgctgtta
caacatcttattactcatgcaccgcatggcaaaggccgtcgtccggtgcgtgcgctgatc
ctgacgccaacccgcgaactggcggctcaaattggcgaaaacgtccgcgattacagcaaa
tatctgaacattcgctcactggtggttttcggtggtgtgagcattaacccgcagatgatg
aaactgcgtagtggtgtagatgtgctggtggcaacgccaggccgtttactcgatctggaa
catcaaaacgcagtgaaactggatcaagttgagatcctggtactggatgaagctgaccgt
atgctggatatgggctttatccatgatattcgtcgcgtgctggctaaactgccggctaaa
cgtcagaacttgctgttctccgcaacgttctctgacgacattaaatcgctggcagaaaaa
ctgctgcataacccgctggaaattgaagtcgcgcgtcgcaataccgcgtctgagcaggtc
agccagtttgttcacttcgtggataaaaaacgcaaacgtgaattgctgtcacagatgatt
ggtcagggtaactggcagcaggtgctggtctttacccgtaccaagcatggtgcaaaccac
ctggcagaacagctgaataaggatggcatccgcagcgcggcaatccacggcaataaatcg
cagggtgcacgtacgcgtgcgctggccgattttaaatctggcgatattcgcgtgctggtg
gcgaccgacattgctgcgcgtgggctcgacattgaagaactgcctcacgtggtgaactac
gagctgccaaacgtaccggaagattacgtccaccgtattggtcgtaccggtcgtgctgcg
gcaaccggtgaagcgctgtctctggtgtgcgttgatgagcacaaactactgcatgacatc
gagaaactgctgaaaaaagagatcccacgtattgccgttgatggctatgcgccggacccg
tcgattaaagcagagccaatccagaacggacgccagcagcgtggtggcggcggtcgtgga
caaggcggagcgggtcgcggtcaacagcctcgtcgtcaggacggcggtgcgccaaaggcg
aaaccgcgtagtagcgaaggtaaaccggcaggcgacaagccgcggccaccgcgtcgcccg
cgcagaccgtcttcagcgcagtaa
DBGET
integrated database retrieval system
