Citrobacter tructae: E4Z61_08250
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Entry
E4Z61_08250 CDS
T07250
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
citz
Citrobacter tructae
Pathway
citz03030
DNA replication
citz03430
Mismatch repair
citz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E4Z61_08250 (holB)
03430 Mismatch repair
E4Z61_08250 (holB)
03440 Homologous recombination
E4Z61_08250 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
citz03032
]
E4Z61_08250 (holB)
03400 DNA repair and recombination proteins [BR:
citz03400
]
E4Z61_08250 (holB)
Enzymes [BR:
citz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E4Z61_08250 (holB)
DNA replication proteins [BR:
citz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E4Z61_08250 (holB)
DNA repair and recombination proteins [BR:
citz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E4Z61_08250 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
QBX80351
UniProt:
A0ABX5T1M1
LinkDB
All DBs
Position
complement(1541861..1542865)
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AA seq
334 aa
AA seq
DB search
MKWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLMCQQPEGHKSCG
HCRGCQLMQAGTHPDYYSLLPEKGKSTLGVDAVREISEKLYEHSRLGGAKVVWIPDAAQL
TDAAANALLKTLEEPPAQTWFFLATIEPARLLATLRSRCRLHHLAPPVESYSVSWLAREV
TAPQDALLSALRLSAGSPGAALTLLQAESWAHRSDFCAALANTLHSGDWYLLLAALNHEQ
AAARLHWLATLLTDALKRPYGVAHLTNPDALALISSIAERFSVAQIQAILGDVCHCRQQL
LNVTGVNRELVLTDLILRIEHYLQPGTVLPVPHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtacccatggttacgacccgattttgaaaaactggtcgccagttatcaggcg
ggtcgcggtcaccatgcgttactgattcaggcgttacccggcatgggtgacgatgcgctg
atttatgccctcagccgttatctgatgtgccagcagccggaaggacataaaagctgcggg
cattgccgtggctgccagttgatgcaggcaggaacgcatcctgattattactcattgctg
ccggagaaagggaaaagtacgctgggtgtggatgccgtgcgtgaaatcagtgaaaagctg
tacgagcattcccgtcttggcggcgccaaggtagtgtggatccccgatgccgcccagtta
acggatgctgcggccaatgccttactgaagacgctggaagagccgccagcgcaaacctgg
tttttccttgccactatcgagccggcgcgcttacttgccacattgcgtagccgctgtcga
ttgcatcaccttgcgcccccggtggaatcgtattcggtttcctggctggcccgcgaagtg
actgccccgcaggatgcacttcttagcgcattacgcctgagcgcggggtcccctggggct
gcattaacgctgctccaggcagaaagctgggcacaccgtagtgatttctgtgcagcgctg
gcgaacaccttgcactccggagactggtatctcctgctggcggcgctgaaccatgaacag
gcagccgcccgtttacactggctggccacgctgcttaccgatgcgcttaaacgcccgtat
ggcgttgctcatttaacgaatcctgatgcgctggcattgatatcatcaattgctgaacgg
ttttctgtcgctcagattcaggcgatacttggtgacgtttgtcattgtcgccaacagttg
ctaaacgtgacgggtgtaaaccgtgaactggtattaaccgatcttatcctgcgtattgag
cattacctgcaaccaggcaccgtactgcctgttccccatctttga
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