Citrobacter tructae: E4Z61_13290
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Entry
E4Z61_13290 CDS
T07250
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
citz
Citrobacter tructae
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
citz03021
]
E4Z61_13290 (rapA)
Transcription machinery [BR:
citz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
E4Z61_13290 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QBX81286
LinkDB
All DBs
Position
2615412..2618318
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFSSTGENRLYARSDCPVTRVMFNPGDT
ITSHEGWQLHVDEVKEENGLLAYIGTRLDTEETGVVLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFETEQLIICSLDFARRSKQRLEHLCDAEWDLLVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPSRFHDFEQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGEMIGEQDIEPLLQAANSESDDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVMLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDTVYNNLIGYLAEPENT
EGFDDLIKTCREQHDALKVQLEQGRDRLLEIHSNGGEKALALAESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGDNLIVLTPSDHMLVPDFPGLPEDGCTITFERDIALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVEQSAR
ALIDAARKEADEKLSAELSRLEALRAVNPNIRDDELAAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatactgaaagcgaattgggacttggt
accgttgtcgccatggatgcgcgaaccgtcaccctacttttctcctcgacgggtgaaaac
cgtctgtatgcgcgcagtgactgccccgtgacccgcgtgatgttcaatcctggtgatacg
ataacaagccatgaaggctggcaattgcatgtcgatgaagtaaaagaagaaaacggactg
cttgcctatatcggaacccgccttgataccgaagaaaccggtgtcgtactgcgtgaagtg
ctgctcgacagcaaactggtattcagcaaaccgcaggaccgtctgtttgctggccaaatc
gaccgtatggaccgctttgcgctgcgctaccgtgcgcgtaaatttcagagcgagcagtat
cgtatgccgtggagtggtctgcgtggtcaacgtaccagcctgatcccgcaccagctcaac
attgcccatgatgttggtcgtcgccatgccccgcgcgttctgctggcagatgaagttggt
ttagggaaaaccattgaagccgggatgatcctgcatcaacaattgctgtccggcgccgcc
gaacgcgtactgatcatcgtccccgagacgttacaacaccagtggctggtcgaaatgctg
cgccgcttcaacctgcgctttgcgctgtttgatgatgaacgctatgccgaagcgcagcat
gacgcctacaacccgtttgaaaccgaacagctgatcatctgctcgctggattttgcccgt
cgtagcaaacagcgtctggaacatttgtgtgatgcagaatgggatctgttggttgtcgat
gaagctcatcacctggtgtggagcgaagatgcgccaagccgcgagtatatggcgattgaa
caactggctgagcgcgtaccgggcatcctgctgctgaccgcaacaccggaacagctgggc
atggaaagccactttgcgcgtttgcgtttactggatccaagccgtttccacgattttgag
cagttcgttgaagagcaaaaaaattaccgtccggttgccgatgccgtcgccatgctgctg
gcgggcaataagctgagcaacgatgagctaaacatgctgggtgagatgattggcgagcag
gacattgaaccattgttgcaagccgcgaacagcgagagtgacgacgctcagagcgcacgc
caggaattggtttcgatgctgatggaccgtcatggcaccagccgcgtactgttccgtaac
acccgtaatggcgtgaaaggcttccctaaacgcgaactgcataccatcaagctgccgctg
ccaacccaatatcagacggcgatcaaagtctccggcattatgggcgcacgtaagagtgca
gaagagcgcgcacgcgacatgctctatccggaacagatttatcaggagttcgaaggcgat
accggcacctggtggaactttgatccccgcgtggaatggttgatgggctacctgaccagc
catcgttcgcagaaggtactggttatttgtgcgaaagcgaccaccgcgttgcagctggag
caggtattgcgcgagcgcgaaggtattcgtgccgccgtattccatgaagggatgtcgatc
attgaacgtgaccgcgccgctgcctggtttagcgaagaagacagcggcgcgcaggtcatg
ctgtgctcggagatcggttctgaaggccgtaacttccagttcgccagcaacctggtgatg
tttgatctgccgtttaacccggatctgctggaacagcgtattggtcgcctggatcgtatt
ggtcaggcgcatgatattcagatccacgtcccgtatctggaaaaaaccgcgcagtccgtg
ctggtgcgctggtaccacgaaggtctggatgcgtttgagcacacttgcccaaccgggcgt
actatttatgacacggtctataacaacctgattggttatctggcagagccggaaaacacc
gagggttttgatgacctgattaaaacctgccgtgaacagcatgacgcgctgaaagtccag
ctggaacaagggcgtgaccgtctgctggaaattcactccaacggtggcgaaaaagcgctg
gcactggctgagagcattgaagagcaggatgatgataccagcctgatcgccttcgccatg
aacctgtttgatatcgtcggtattaatcaggacgatcgcggtgacaatctgattgtgctg
acgccgtccgaccatatgctggtccctgatttcccggggctgccggaagatggctgcacg
attacctttgaacgtgatattgcgctgtcgcgtgaagatgcgcagtttatcacctgggag
catccgctgatccgtaatggtctggatctgatcctgtctggcgataccggtagcagcacg
atttccctgttgaaaaacaaagcattaccggttggaaccttgctggttgaactggtgtat
gtggttgaagcgcaggcaccgaaacagctgcagttgaaccgcttcctgccgccgacgccg
gtgcgcatgctgctggataaaaacggtaacaacctcgccgcgcaggtggagtttgaaacc
tttaaccgccagctcagcgccgttaaccgccataccggtagcaagctggtcaacgccgtg
cagcaagatgtccatgcgattctgcaactgggtgaagcgcaggttgagcaatcagcccga
gcgctgatcgacgccgcgcgtaaagaggcggacgagaagttgtctgcggagctgtcgcgt
ctggaagcactgcgcgctgttaacccgaacatccgtgatgacgaacttgccgcgattgaa
agcaaccgtcaacaagtgatggaaagcctggatcaggctggctggcgtctggatgccctg
cgcctgatcgtcgtgacgcatcagtaa
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