Citrobacter tructae: E4Z61_16605
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Entry
E4Z61_16605 CDS
T07250
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
citz
Citrobacter tructae
Pathway
citz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4Z61_16605 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
citz03019
]
E4Z61_16605 (recQ)
03400 DNA repair and recombination proteins [BR:
citz03400
]
E4Z61_16605 (recQ)
Enzymes [BR:
citz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4Z61_16605 (recQ)
Messenger RNA biogenesis [BR:
citz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4Z61_16605 (recQ)
DNA repair and recombination proteins [BR:
citz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E4Z61_16605 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QBX81888
UniProt:
A0ABX5T9C5
LinkDB
All DBs
Position
complement(3322353..3324182)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNLEMGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQIRLLY
IAPERLMLDNFLENLAHWNPMLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFVAL
TATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAGAYHAGLENSVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIREMAHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAHHSALQLTEAARPVLRGEVPLQLAVPRIVALKPRAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSPSEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaaatgggcgctaaacaggttttgcaggaaacc
tttggctaccaacagtttcgccctggtcaggaagaaatcatcgacaccgtgctctctggc
cgcgactgtctggtcgttatgccaaccggtggtggtaaatccctctgttatcaaattccc
gcattattgctgaacggcctcaccgttgtcgtttcgccactgatttccttgatgaaagac
caggtcgatcagctgctggcaaacggcgtggcggcggcgtgcctgaactcaacccagagt
cgtgaacagcagcaagaggtgatggcaggctgtcgcagcgggcaaatccgcctgctgtac
attgcacccgagcgcctgatgctggataacttcctggaaaatctggcgcactggaatccg
atgctgctggcggttgatgaagcgcactgtatttcccagtgggggcatgatttccgcccg
gaatatgccgctctgggccagctgcgtcaacgcttccccgcgctgccgtttgtggcactc
acggccaccgccgatgacaccacccggcaggatattgtacgtttgctcgggcttaacgat
ccccttattcagatcagcagcttcgaccgtccgaacattcgttacatgctgatggagaaa
tttaagccgctcgatcagctgatgcgctacgtacaagaacagcgcggcaagtccggcatt
atttactgtaacagccgcgcgaaggttgaagacacagcagcacgcctgcaaagtcgtggg
atcagcgccggggcttatcatgccgggctggaaaacagcgtgcgcgccgacgtgcaggag
aaattccagcgtgacgacctgcaaatcgtcgtcgcgaccgtagcgtttggtatgggaatt
aacaaacccaacgtgcgcttcgtggtgcattttgatatcccgcgtaacatcgagtcctac
tatcaggaaaccgggcgtgccgggcgtgacggcctgcctgcagaagcgatgctgttttac
gatccggcagatatggcgtggttacgccgttgtctcgaagaaaaaccagccggacaactg
ctggatatcgagcggcataagctcaacgcgatgggggcctttgccgaggcgcaaacctgc
cgtcgtctggtgctgctgaactattttggcgaagggcgtcaggagccgtgcggtaactgc
gatatttgtctcgatccgccaaaacagtacgacggattaatggatgcgcgtaaagcgctg
tcgacgatctaccgcgttaaccaacgttttggtatgggctatgtcgtcgaggttctgcgc
ggggcaaataaccagcgtattcgtgagatggctcatgacaaactgccggtctacggcatt
ggccgtgagcagagccacgagcattgggtcagcgtaattcgccagcttattcacctcgga
ttggtcacgcaaaatattgctcaccactctgcgttacagttaaccgaagctgcgcgtccg
gtactgcgcggtgaagttccactacagcttgccgtgccgcgtattgtggcgctgaaaccg
cgcgcaatgcagaaatcctttggcggcaactacgatcgcaaactgttcgccaaattgcgt
aagctgcgtaaagccattgctgatgaagagaatatcccgccgtatgtggtcttcaacgat
gccacgttgattgaaatggccgagcaaatgccggtttcaccgagcgaaatgctgagcgtc
aacggcgtgggaatgcgtaaacttgagcgttttggcaaagagtttatggcacttatccgc
gcacatgttgatggtgacgacgaagagtag
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