Citrobacter tructae: E4Z61_17140
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Entry
E4Z61_17140 CDS
T07250
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
citz
Citrobacter tructae
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
citz03032
]
E4Z61_17140 (gyrB)
03400 DNA repair and recombination proteins [BR:
citz03400
]
E4Z61_17140 (gyrB)
Enzymes [BR:
citz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
E4Z61_17140 (gyrB)
DNA replication proteins [BR:
citz03032
]
Prokaryotic type
DNA Topoisomerases
E4Z61_17140 (gyrB)
DNA repair and recombination proteins [BR:
citz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E4Z61_17140 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
QBX81982
LinkDB
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Position
3432490..3434904
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AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIRREGKVHQQTYVHGVPQAPLAVTGETEATGTLVRFWPSHETFTNVV
EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNAHAPALAGEALEKLVSEYNATQKMIGRMERR
FPRSLLKELVYQPTLTEADLADEAKVTTWVSQLVNVLNENEMHGSTWNSFVRKDAELNLF
EPVIRVRTHGVDTDYPLEHEFVTGGEYRRICTLGEKLRGLIEDDAFIERGERRQPVASFE
QALDWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaaggactggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctacaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagatatcgtg
gtgacgattcacgctgacaactccgtatccgttaccgatgatggccgtggtatcccaacc
ggtattcacccggaagaaggtgtttcggcggcggaagttatcatgaccgtgctgcacgca
ggcggtaaattcgatgataactcctacaaagtgtccggtggtctgcacggagtaggcgtt
tccgtggttaacgccctgtcgcagaagttggagctggtgattcgtcgcgaaggcaaagtg
catcagcaaacttacgtgcacggcgtgccacaggcaccgctggctgttacaggcgagact
gaagcaaccggtaccctggtgcgtttctggccaagccatgaaaccttcaccaatgtcgtt
gagttcgaatacgacattctggctaaacgtctgcgcgagttgtcattcctgaactccggc
gtatccatccgcttgcgtgataagcgcgacggcaaagaagatcatttccactacgaaggc
ggcatcaaggcgtttgttgagtatctcaacaagaataaaacgccgattcacccgaatatc
ttctatttttccaccgaaaaagacggtattggcgttgaagttgcgctgcagtggaacgat
ggtttccaggaaaacatctactgcttcaccaacaacattccgcagcgtgatggcggtact
caccttgcaggcttccgtgcggcgatgacccgtactctgaacgcctacatggacaaagaa
ggctacagcaaaaaagcgaaagtcagtgccactggtgacgatgcccgtgaaggcctgatt
gctgtcgtttccgtgaaagtgccggatccaaaattctcttcgcagaccaaagacaagctg
gtttcctccgaggtgaaaacggcggtagaacagcagatgaacgaactgctgagtgaatac
ctgctggaaaacccgtctgacgctaaaattgtcgtcggcaaaattatcgatgctgcgcgt
gctcgtgaagcggcgcgtcgcgctcgtgaaatgacccgtcgtaaaggtgcgttggactta
gctggcttgccgggcaaactggcggactgtcaggaacgcgaccccgctcactctgaattg
tacctggtggaaggggactctgcgggcggctctgcgaagcagggacgtaaccgtaagaac
caggcgattttgccactgaagggtaaaattctgaacgttgagaaagcgcgctttgacaag
atgctctcttctcaggaagtggcgacgctgattactgcgctcggttgcggtatcggtcgc
gacgagtacaacccggataaactgcgctatcacagcattatcatcatgaccgatgcggac
gtcgatggctcgcacatccgtacgctgctgttgacgttcttctatcgtcagatgccggaa
atcgttgaacgcggtcacgtctacattgcgcagccaccgctgtacaaagtgaagaaaggc
aagcaggaacagtacatcaaagacgatgaagcgatggatcagtaccagatctctatcgct
cttgatggtgccacgctgcacaccaacgcccacgctccggcgctggcgggtgaggcgctg
gaaaaactggtttctgaatacaacgctacgcagaaaatgattggtcgcatggagcgtcgc
ttcccgcgctcattgctgaaggaactggtttaccagccgacgctgactgaagccgatctg
gctgatgaagctaaagttacgacttgggtttcccagttggttaacgtgctgaatgaaaac
gaaatgcacggcagcacctggaatagctttgtacgtaaagacgcagaattgaacctgttc
gaaccggtgattcgcgtgcgtactcacggtgttgataccgattacccgctggagcatgag
tttgtgaccggtggtgaataccgtcgcatttgcacgttgggtgagaaactgcgcggcctg
atcgaagacgatgcatttattgaacgtggtgagcgtcgtcagccggttgccagcttcgag
caggcactggattggctggtgaaagagtcccgtcgtggtttgtctattcagcgttataaa
ggtctgggtgaaatgaacccggatcagctgtgggaaaccaccatggatccggaaagccgt
cgcatgctgcgtgtgaccgtgaaagatgcgattgctgccgatcagttgttcactacgttg
atgggtgacgccgttgaaccgcgtcgtgcgtttatcgaagagaacgccctgaaagcggcg
aacatcgatatctaa
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