Citrobacter tructae: E4Z61_19515
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Entry
E4Z61_19515 CDS
T07250
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
citz
Citrobacter tructae
Pathway
citz02020
Two-component system
citz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E4Z61_19515 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E4Z61_19515 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
citz03021
]
E4Z61_19515 (rpoN)
Transcription machinery [BR:
citz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E4Z61_19515 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QBX82427
UniProt:
A0ABX5TA15
LinkDB
All DBs
Position
complement(3927714..3929147)
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEIDTQE
KQDSDSLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQSL
QDYLMWQVGLTPFSDTDRAIATSIVDAVDETGYLTVSLDDILESMGDDDIGMDEIEAVLK
RVQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLAEARLIISDHLDLLANHDFRSLMRVTR
LKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNDRWVVELNSDSIPRLQIN
QHYAAMCNGARNDADSQFIRTNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaacttaggcttagccaacaactggcgatgacgccgcagctacaa
caggctatccgtctgttgcagttgtccacgctggaacttcagcaagaacttcagcaagcg
ctggaaagtaacccactgctcgagcaaaccgatcttcacgacgaaattgatacccaggaa
aaacaggacagcgattccctcgacaccgcagatgcgctcgaacaaaaagagatgccggaa
gagctgccgcttgatgccagttgggatgagatttacaccgcaggcacgccgtccggcacc
agcggggattacatcgatgacgaactgcctgtgtatcagggtgagaccacgcagtcactg
caggattacctgatgtggcaagtaggattaaccccgttctctgataccgatcgcgccatt
gccacgtcaattgttgatgcggttgatgaaaccgggtatctcaccgtttctctggacgat
attctcgaaagcatgggcgatgacgacatcgggatggatgaaatcgaagccgtgcttaaa
cgcgttcaacgttttgatcccgttggcgtcgcggcaaaagatctccgcgattgcttactg
atccaattgtcgcagtttgacaaaactaccccgtggctggcagaagcaagacttatcatc
agcgatcacctcgatctgttagccaatcatgatttccgctcgctgatgcgcgtgacccgg
ttaaaagaagatgttctgaaagaggccgtcaatctgatccagtcgctggatccgagaccc
ggacagtcgatccaaaccggtgagccggaatacgtgatcccggatgtactggtgcgcaag
cataacgatcgttgggtcgtcgaactgaacagtgacagcattccacgcttacagattaat
cagcactatgccgccatgtgcaatggtgcgcgcaacgatgccgacagtcagtttattcgg
acaaatttacaggatgcgaagtggctgattaaaagtctggaaagccgcaacgacacgctg
ttgcgcgtcagtcgctgtatcgttgagcagcagcaggccttctttgagcaaggcgaagaa
tttatgaaaccgatggtgctggcggatatcgcccaagccgtcgaaatgcacgaatcgacc
atttcccgagtgaccacgcaaaagtatctgcacagtccacgcggcatttttgaactcaag
tatttcttttccagccacgtcaacactgaaggcggaggcgaagcctcatccacggcgata
cgcgcgctggtgaagaaattaattgctgcggagaaccctgcgaaaccgctgagtgacagc
aagttaacctctatgctgtcagaacagggtatcatggtggcgcgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtctaaccagcgcaaacagctggtctga
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integrated database retrieval system