Citrobacter tructae: E4Z61_21370
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Entry
E4Z61_21370 CDS
T07250
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
citz
Citrobacter tructae
Pathway
citz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E4Z61_21370 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
citz03400
]
E4Z61_21370 (recB)
Enzymes [BR:
citz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E4Z61_21370 (recB)
DNA repair and recombination proteins [BR:
citz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E4Z61_21370 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
bDLD3
Motif
Other DBs
NCBI-ProteinID:
QBX82770
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All DBs
Position
4322726..4326268
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AA seq
1180 aa
AA seq
DB search
MNDAAESLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRETTDNPLYARLLDEIADKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVIFETWKGPQALLRDIDRYLQGEAPVIKSPPSADETLASRHEKILARINQIKQQWRDSV
EELDGLLEVSGIDRRKFNRGNQGKWIEKINAWAQEETQSYQLPDALEKFSQRFLEERTKT
GGITPQHPLFVAIDELLGEPLTLRDLVITRALAEIRETVAEEKRRRGELGFDDMLSRLDA
ALRSESGDALATAIRTRFPVAMIDEFQDTDPQQYRIFRRIWQHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNGVNTLFRQMNDAFMFREIPFSPVKS
AEKNQSLRFVLHGETQPAINMWLMEGESCGVGDYQSYMARVCATQIRDWLKAGHTGDALL
MSANTSRPVRASDISVLVRSRQEAALIRDALTQLAIPSVYLSNRDSVFDTLEAQELLWVL
QAVMTPERENTLRSALATSMMGLNAQDIETLNNDEQAWDAVVEEFDGYRQLWHKRGVMPM
LRSLMSARQIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLSQHILEPDS
NASSQQLRLESDKHLVKIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRRSFEAVLDL
SQADESVELAEVERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR
LLQKGEPMDAAGLRAAIDALCSDDIACRVPEEPDTERWLSAEERQETLSARTLSRLPGDN
WRVTSYSGLQQRGHGIAQDLIPRLDIDAAGVGEAIVESGLTPHQFPRGASPGTFLHSLFE
DLDFTQPVDPLWVQEKLTLGGYDAHWEPILTQWLDAILQAPLNETGVSLSALSAHEKQVE
MEFYLPISQPLMASQLDALIRQYDPLSAGCPPLDFMQVRGMLKGFIDLVFRHQGRYYLLD
YKSNWLGEDSAAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIY
LFLRGVDSENPQQGIYVTRPDGELVALMDEMFAGAALEEK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccgctgagtcccttgatcctctccgcttgcccctgacgggcgagcgcctg
attgaagcctccgcaggcaccggtaaaacctttaccatcgccgccctgtatttacgttta
ctgcttggactgggcggctctgccgcctttccccgtccgctgaccgtcgaagaactgtta
gtagtcacctttacggaggcggctactgaagagctgcgcggtcgtattcgtagcaacatc
catgaactgcgcattgcctgcctgcgcgaaaccaccgataacccgctttacgcccgtctg
ttagatgaaattgccgataaaaagcaggccgcgcagtggctgttgctggctgaaagacag
atggatgaagcggcggtttttaccatccacggtttttgtcagcgtatgctcagtctcaac
gcttttgagtccggcatgctgttcgaacaacagctgattgaagatgaatcactgctgcgt
tatcaggcctgcgcagacttctggcgtcggcattgctacccgctgccccgtgacattgcg
caggtgatttttgaaacgtggaaagggccgcaggcgctgctaagggatatcgatcgctat
ctgcagggagaagcgccggtcattaaatcaccaccgtcggcagacgaaacgctggcatcc
cggcacgaaaaaatcctcgcgcgtatcaaccagatcaagcagcaatggcgtgattccgtt
gaagagctggatggtctgcttgaagtctccggaatcgaccgacgcaaatttaaccggggt
aatcagggcaagtggatcgaaaagatcaacgcctgggcgcaggaagaaacacaaagctat
cagctgcctgatgcgctggagaaattctctcagcgttttttagaagagcgcaccaaaaca
ggcggcataacaccgcagcacccgcttttcgtcgctattgatgaactgcttggcgagccg
ttgaccctccgcgatctggtgattacccgggcgttggcggagatccgcgagacggtagcc
gaagaaaaacgccgacgcggtgaactgggttttgacgatatgctcagccgtctggatgcg
gcgctgcgtagcgaaagcggtgacgcgctggcgacagccatccgcacccgttttccggtg
gcaatgatcgatgagttccaggataccgacccgcaacaatatcgcattttccgccgcatc
tggcagcatcagccggataccgcactgctgctgattggtgaccccaaacaggcgatttac
gcgtttcgcggcgcggatatttttacctatatgaaggcgcgcagcgaagttagcgcgcat
tatacgctcgacactaactggcgttcggctcctggcatggttaatggtgtgaatacactg
ttccgtcagatgaacgacgcctttatgttccgcgaaatcccctttagcccggtgaagtca
gctgagaaaaaccagtcgctgcgctttgtcctgcatggtgaaacgcagccggcaatcaac
atgtggctgatggaaggggaaagttgcggtgtaggtgactaccagagctacatggcccgg
gtttgcgcgacgcaaattcgtgactggctaaaagccgggcatacaggtgatgcgctcctg
atgagcgctaacacatcgcgcccggtacgcgcttcggatatcagcgtgctggtgcgcagc
cgccaggaggcggcgttaatccgcgatgcgctgacgcaactggcgattccatccgtctat
ctttccaaccgtgacagcgtctttgataccctcgaagcgcaggagctgctgtgggtatta
caggcggtgatgacgccggagcgtgaaaacacgctgcgtagcgcactggcaacctccatg
atggggctgaatgcgcaggatattgaaacgctcaataatgatgagcaagcatgggatgcg
gtggtcgaagagttcgacggttatcggcaactctggcacaagcgcggcgtaatgccgatg
ctgcgatcgctaatgtcggcgcgtcagattgcggagaacctgttggcaacggcgggaggc
gagcgtcgcctgaccgatattttgcatatcagcgagctgttacaggaagcgggctcgcag
ctggaaagcgaacatgcgctggttcgctggctatctcagcatatcctggagccagacagc
aatgcgtccagccagcagctcaggctggaaagcgataagcacctggttaaaatcgttacc
atccacaaatcgaaagggctggaatatccgctggtctggttacctttcatcacgcatttt
cgtgttcaagatcaggcgttttatcacgatcggcgctcgtttgaagcggtactggatctc
agccaggccgatgagagcgtcgagctggccgaggttgagcgtctggcggaagacctgcgc
ttgctttacgtcgcattgacccgttcggtatggcactgcagccttggcgtagcgccgctg
gtgcgtcgccggggagataaaaaaggcgacaccgatgtgcatcaaagcgcgttgggccgt
ctgttgcaaaaaggcgagccgatggacgctgccggactgcgcgccgcaattgacgcgctt
tgtagtgacgatattgcctgtcgggtcccagaagaaccggatacagaacgctggctttct
gccgaagagcgccaggaaacgttgagcgcgcggacgttgtctcgtctgccaggcgacaac
tggcgcgtcaccagttattccggtctgcaacagcgcggtcacggtattgcgcaggatctg
atcccgcgactggacatcgatgcagcaggcgtcggtgaagccatcgtggagtccgggctc
acgccgcaccagttcccgcgcggggcgtcgccgggaacatttttgcatagcttgtttgaa
gatcttgattttacccagccggtagacccgctttgggtgcaggaaaaactcacactcggc
ggctatgacgcgcactgggagccgattctgacccagtggctggacgccattctacaggca
ccgctcaacgaaaccggcgtcagcctgagcgcactttcagcgcatgaaaaacaggtggag
atggagttttatctgccgatttcgcagccgctgatggccagtcaactggatgcgttgatc
cgccaatatgatccgctctcagcgggctgccctccgctggattttatgcaggtgcgcggc
atgctgaaagggtttatcgacctggtgttccgtcatcaggggcgctattacctgctcgac
tacaagtctaactggctgggcgaagatagcgccgcttacacccagcaggcgatggccgct
gctatgcaggcgcatcgctatgacctgcaatatcagctttataccttggcgctgcaccgc
tatttacgtcaccgcattgcagactatgactatgaacgccattttggcggcgtgatttat
ctcttcctgcgcggcgttgacagcgaaaatccgcagcagggaatttacgtgacccgtccg
gatggcgagctggttgcgctgatggacgagatgtttgccggtgcggcactggaggagaag
taa
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