Citrobacter tructae: E4Z61_22925
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Entry
E4Z61_22925 CDS
T07250
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
citz
Citrobacter tructae
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
citz03009
]
E4Z61_22925 (srmB)
Enzymes [BR:
citz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E4Z61_22925 (srmB)
Ribosome biogenesis [BR:
citz03009
]
Prokaryotic type
rRNA helicases
E4Z61_22925 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBX83044
LinkDB
All DBs
Position
complement(4662020..4663348)
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLL
PVLQHLLDFPRKKSGPPRVLILTPTRELAMQVADHARELAKNTHLDVATITGGVAYMNHM
EVFSENQDIVVATTGRLLQYIKEENFDCHAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSADPSTRERKKIHQFYYRADDIEHKTALLI
HLLKQPEATRSIVFVRKRERVHELAGWLRQAGINNCYLEGEMVQNKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNYDMPRSGDAYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKASRYIDEPLKPRVIDELRPTTRAPSEKSNGKPSKKVLAKRAEKKEKDKEKPRVKKRHR
DAKNIGKRRKPSGSASQQSDKE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctggatgccctccag
gaaaaaggtttcactcgcccgaccgctattcaggcagccgccattccacctgcgctcgat
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatatttgctg
ccagtgttgcagcacctgctcgacttcccgcgcaaaaaatcgggtccaccgcgagtatta
attctgaccccgacccgcgaactggcgatgcaggttgccgatcacgcccgtgaactggcg
aagaatacgcatctggatgttgccaccattactggcggcgtagcctacatgaaccatatg
gaagtcttcagcgaaaaccaggacatcgtggtcgccaccactggacgtctgctgcaatat
attaaagaagagaacttcgactgccatgcggtcgaaacgctgatccttgatgaagccgac
cgtatgctggacatgggcttcgcgcaagatatcgagcatattgccggtgaaacccgttgg
cgtaagcagaccatgttattctctgccacgctggaaggcgatgcgattaaagattttgcc
gagcgcctgctggaagatccagttgaggtatctgcggatccgtccacccgcgaacgcaag
aaaatccatcagttttactaccgtgccgatgatatcgaacataaaacagcgttgctgatc
catctgttaaaacagccggaagcgacccgctctattgtttttgtgcgtaaacgcgagcgc
gtgcacgaactggcgggctggctgcgccaggcagggatcaacaactgctatctcgaaggc
gagatggtgcaaaacaagcgtaacgaagcgatcaaacgcctgaccgatggccgcgtgaat
gtgctggttgccaccgacgttgctgcgcgcggtatcgacattcctgacgtcagccacgtg
tttaactacgacatgccgcgcagtggcgatgcctatctgcaccgcattggccgtaccggt
cgcgcaggccgtaaagggaccgctatttctctggttgaagcgcatgaccacctgctgctc
ggcaaagcgagccgctatattgacgaaccgctgaagccgcgcgtcattgacgaattgcgt
ccaacaacgcgcgcgccaagtgagaaatctaacggtaagccatccaagaaagtgctggcg
aagcgtgccgagaaaaaagagaaagataaagagaagccgcgcgtgaagaaacgtcaccgc
gatgctaaaaatatcggcaaacgtcgtaagccgagcggctctgcctcacagcagtccgac
aaagaataa
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