Citrobacter tructae: E4Z61_22980
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Entry
E4Z61_22980 CDS
T07250
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
citz
Citrobacter tructae
Pathway
citz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
citz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E4Z61_22980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
citz03019
]
E4Z61_22980
03009 Ribosome biogenesis [BR:
citz03009
]
E4Z61_22980
03036 Chromosome and associated proteins [BR:
citz03036
]
E4Z61_22980
Enzymes [BR:
citz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
E4Z61_22980
Messenger RNA biogenesis [BR:
citz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E4Z61_22980
Ribosome biogenesis [BR:
citz03009
]
Eukaryotic type
90S particles
RNase
E4Z61_22980
Prokaryotic type
rRNA processing factors
E4Z61_22980
Chromosome and associated proteins [BR:
citz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
E4Z61_22980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QBX83054
UniProt:
A0ABX5T983
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All DBs
Position
4672248..4672928
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AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEQLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gagctgttgcagcaggcattaactcaccgcagtgccagcagcaaacataacgagcgctta
gagtttttaggcgactctattttgagctttgttatcgccaatgcgttgtaccatcgtttt
ccgcgcgtggatgaaggcgatatgagccgcatgcgcgccacgttggtgcgtggaaataca
ctggctgaattagcccgtgagtttgatctcggcgaatgtttacgtttgggaccgggcgag
ctgaaaagcggcggcttccgtcgtgaatctattctggcagatacggtcgaagcactgatc
ggcggcgtattcctcgacagtgatattcagactgttgagcaactgattcttaactggtat
caaacccgtctggatgaaattagtccgggcgacaaacaaaaagatccgaaaacgcgtttg
caggaatatttgcagggtcgccacctgccgctgccatcttatctggtagttcaggtccgt
ggtgaagcgcacgatcaagaatttactatccactgccaggttagcggcctgagtgaaccg
gtggttggcacaggttctagccgtcgtaaggctgagcaagctgccgccgaacaggcgtta
aaaaaactggagctggaatga
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