Clostridium innocuum: G4D55_01140
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Entry
G4D55_01140 CDS
T06525
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ciu
Clostridium innocuum
Pathway
ciu00260
Glycine, serine and threonine metabolism
ciu00460
Cyanoamino acid metabolism
ciu00630
Glyoxylate and dicarboxylate metabolism
ciu00670
One carbon pool by folate
ciu00680
Methane metabolism
ciu01100
Metabolic pathways
ciu01110
Biosynthesis of secondary metabolites
ciu01120
Microbial metabolism in diverse environments
ciu01200
Carbon metabolism
ciu01230
Biosynthesis of amino acids
ciu01240
Biosynthesis of cofactors
ciu04981
Folate transport and metabolism
Module
ciu_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
G4D55_01140
09102 Energy metabolism
00680 Methane metabolism
G4D55_01140
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G4D55_01140
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
G4D55_01140
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
G4D55_01140
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
G4D55_01140
Enzymes [BR:
ciu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
G4D55_01140
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QIX07758
LinkDB
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Position
232791..234020
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AA seq
409 aa
AA seq
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MNDKKIQEAIEREAERQLYNIELIASENYVSRDVLEAAGSILTNKYAEGYPSKRYYGGCV
HVDEIEEIARERAKQLFNAEHANVQPHSGSQANMGVYLSVLQPGDTVLGMNLTAGGHLTH
GHPLNFSGTLYRFVDYGVTKDSETIDYEEVRRVALKEQPKLIVAGASAYPRVIDFAKFRE
IADEVGAYFMVDMAHIAGLVAAGEHPSPVPYADFVTTTTHKTLRGPRGGLILCKKEHAAL
LDKKVFPGMQGGPLMHIIAAKAVCLQEAMQPEFKEYAKQIIANCAVMSNTLKEEGFRIVS
GGTDNHLILVDVKSSLNMSGKLAEKLLDEAGITCNKNTIPFETEKPFVTSGIRLGTAAMT
TRGFKENEFRQVALWISRVLKNAEDEAVREEVRKEVRALTVQFPLPNEK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataagaaaattcaggaagccattgaaagagaagcagagcgccagctgtataat
atcgaattgatcgcatcagaaaattatgtatcaagggatgtactggaggctgccggaagc
atactgacaaataaatatgcagaaggctatccgagcaagcgttattacggaggctgtgta
catgttgatgagatagaagaaatcgcaagagagcgggcaaagcagctgtttaacgctgag
catgccaatgtgcagccgcacagcggttctcaggcaaacatgggcgtatatttatctgtt
ttacagccaggtgataccgtactggggatgaatctgacggcaggaggtcatctgacacac
ggacatcctttaaacttttccggaacgttgtacaggtttgtggattacggtgtaacaaag
gacagtgaaacgatcgattatgaggaggtgcgcagagtcgcattaaaggaacagccgaag
ctgattgttgccggtgccagtgcctatccaagagtaattgattttgcgaaattccgtgaa
attgcggatgaagtcggtgcatatttcatggtggatatggctcatattgcaggacttgta
gcggcaggtgaacacccgagcccggtaccttatgcagattttgtgacaacgacgacacac
aaaacactgcgcggacctcgcggaggattgatcctctgtaaaaaagagcatgcggcattg
ctggataaaaaggtgtttccgggtatgcagggcggcccactgatgcatatcattgcggct
aaggcggtatgtctgcaggaagctatgcagccggagttcaaggagtacgcaaaacagata
attgcaaactgtgcagtcatgagcaatacattgaaggaagaaggctttcgcattgtaagc
ggcggaacggataaccatctgattcttgttgatgtgaaatcctctctgaacatgagtgga
aagcttgcggagaagctgctggatgaagcaggaattacctgcaataagaacacgattcca
tttgaaacagaaaagccgtttgtgacaagcggtatccgactggggactgcggcaatgaca
accagaggcttcaaggaaaatgaattccgtcaggttgccttatggatcagccgtgtgctg
aaaaatgcagaggatgaagcagtgcgtgaagaagtgcgcaaggaagtgcgtgcgcttacc
gttcagtttccgctgccgaatgagaaataa
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