Clostridium innocuum: G4D55_01405
Help
Entry
G4D55_01405 CDS
T06525
Name
(GenBank) penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
ciu
Clostridium innocuum
Pathway
ciu00550
Peptidoglycan biosynthesis
ciu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G4D55_01405
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ciu01003
]
G4D55_01405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
G4D55_01405
Enzymes [BR:
ciu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
G4D55_01405
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
G4D55_01405
Glycosyltransferases [BR:
ciu01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
G4D55_01405
Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
G4D55_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QIX07808
LinkDB
All DBs
Position
complement(282460..284322)
Genome browser
AA seq
620 aa
AA seq
DB search
MKRIRKLVFGMIFALLTLIVCVYAYALFNRLPLDEQRKNITIYDVNGDIIYESNFKKNMQ
WTSIDDIPEFVQDAFVSVEDKRFYYHAGFDPVRITKALGTNLIHGDIRQGGSTITQQYAK
NLFLTNEQTLSRKVQEFFYAARLEMQYSKKDILEGYLNTVYFGHGVYGVNAAAEYFFDKK
LNQLSIAETAMLIGIPNGPSIYSPFLHKDNAIKREHLILEVLKNNGVITSKQYEAAKKEK
LKLSTNVNISTYGIDEYYIDAVIQELSKLNIDLNREIHVHTYYDPKVQMQLSNAVTKHVD
LSSELEVAGIITQPFTGNVMAMVGGKDYTISQYNRAIYSSRQVASTIKPLLYYCALQQGF
TPSTQFTSQKTTFRVSDDEEYAPTNYGNVYANGKISMINAISLSDNIYAVKTQLFLGVDT
LHNALLDFNIRQSSPNPSEALGTVNMSLLELSRIYNTFASEGLYVKPALISHITSGNDVV
YKREVQPKRLLQRDETLILNQMMTSTFDIRNKSYTFSSMYGHEPDITVAAKSGTSDWDSL
VMGFNPEYTVGIWSGFDDNRELEKQYYTISKDIFKDTFNGLYKKRKGVWYQPSDGIQEKR
VNPITGTEDSGGSVYWFKKE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatccgcaagctggtgtttggaatgatcttcgcactgctcacactgattgta
tgtgtctatgcctacgccctgttcaatcgactaccgctggatgaacagagaaagaacatt
acaatctatgatgtgaacggcgatatcatatacgaatccaatttcaaaaaaaatatgcag
tggacgtccattgatgatattcccgaatttgttcaggatgcgtttgtgagtgtagaggac
aaacgtttctactaccatgccggctttgatcctgtgcgcattacaaaggcgctgggtacg
aatctcattcatggggatatccgacagggcggctccacgatcacacagcaatatgcaaaa
aatctgtttctgacaaatgaacagaccttatcgaggaaggtgcaggaatttttttatgca
gcccgtctggaaatgcagtacagcaaaaaggacattctggagggctatctgaacacggtc
tatttcggacacggtgtgtatggtgtgaatgctgctgcagagtatttctttgataaaaag
ctgaatcagctcagcatagcggaaactgccatgctgataggaataccaaacggtcccagt
atttattccccgtttctgcacaaggacaatgcaatcaagcgggagcatttgattctggag
gtattgaagaataacggtgtcattacatcaaagcagtatgaggcagccaaaaaggaaaag
ctgaagctttccaccaatgtaaacatcagtacctacggtattgatgaatactacatcgat
gcggttattcaggagctcagcaagctgaatatcgatttgaaccgggaaattcatgtacac
acctattatgacccaaaggtacaaatgcagctgagcaatgctgtcacgaagcatgtggat
ttaagcagtgagctggaggtagccggcattatcacacagcccttcaccggaaacgtaatg
gctatggttggaggaaaggattatacgatttcacaatacaatcgcgccatctattcctcc
cgacaggtcgccagtaccatcaagccgctgctgtattactgcgccctccagcagggcttt
accccatccacgcaattcacctcacagaagacaaccttccgcgtatccgatgatgaggag
tatgcgccgaccaattacggcaatgtctatgcgaacggaaaaatttccatgatcaatgcc
atttccctgagtgacaatatctacgccgtaaaaacacagctttttctcggtgtggataca
ctgcacaacgcactgcttgatttcaacatccgtcaatcctctccgaatccaagtgaggcg
ctcggtaccgtgaatatgtcgctgctggagctgagccgtatttacaatacctttgcttcc
gagggtctgtatgttaagcctgcgctcatttctcatatcaccagcgggaatgatgttgta
tacaagcgtgaggttcagccgaaacggctgctccagcgggatgaaacactgatactgaat
cagatgatgacctcgaccttcgatatccgcaataaatcctataccttctcaagcatgtac
gggcatgagccggatatcaccgtggcggcaaaatcaggcaccagcgactgggattcactg
gttatgggctttaatccggaatataccgtaggcatctggagcggcttcgatgataaccgc
gaactggaaaagcagtattacaccatcagcaaggacatcttcaaggatacctttaacggg
ttatacaaaaaacgtaagggtgtctggtatcagcctagtgacggcattcaggaaaaacga
gtgaatcccatcactggtacggaagattccggaggctctgtctactggttcaaaaaagag
tag
DBGET
integrated database retrieval system