Clostridium innocuum: G4D55_01420
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Entry
G4D55_01420 CDS
T06525
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ciu
Clostridium innocuum
Pathway
ciu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G4D55_01420 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciu03021
]
G4D55_01420 (rpoE)
03400 DNA repair and recombination proteins [BR:
ciu03400
]
G4D55_01420 (rpoE)
Transcription machinery [BR:
ciu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G4D55_01420 (rpoE)
DNA repair and recombination proteins [BR:
ciu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G4D55_01420 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QIX07810
LinkDB
All DBs
Position
287129..287449
Genome browser
AA seq
106 aa
AA seq
DB search
MKKSMVDVAYDLMSTKKKAIVFLKLWEEVCQVMAFTKQQEEDNIAQFYSDLSLDDRFVNV
GENKWDLRERHTYHEVVVDTEEILIDEEADDDYEEDDAAKAGDEEF
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtctatggtcgatgtagcatatgatttgatgtctacgaagaagaaagctatt
gtattcctgaagctgtgggaagaagtctgccaggttatggcatttacgaagcagcaggag
gaagacaatatcgcacagttttacagtgatctgtcgctggatgaccgatttgtaaatgtc
ggagaaaacaaatgggacctcagagaacgccacacctatcatgaagttgttgtggatacg
gaagaaatccttatcgatgaggaggctgacgatgactacgaggaagacgatgctgcaaaa
gcaggggatgaagaattctaa
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integrated database retrieval system
