Clostridium innocuum: G4D55_02285
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Entry
G4D55_02285 CDS
T06525
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ciu
Clostridium innocuum
Pathway
ciu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4D55_02285 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciu03019
]
G4D55_02285 (recQ)
03400 DNA repair and recombination proteins [BR:
ciu03400
]
G4D55_02285 (recQ)
Enzymes [BR:
ciu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4D55_02285 (recQ)
Messenger RNA biogenesis [BR:
ciu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G4D55_02285 (recQ)
DNA repair and recombination proteins [BR:
ciu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G4D55_02285 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
DUF5395
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
QIX07977
LinkDB
All DBs
Position
457766..459568
Genome browser
AA seq
600 aa
AA seq
DB search
MMKDYEVLKKYFGYESFREGQQELITNILERHDVLGIMPTGAGKSICYQVPAVMLEGITL
VISPLISLMKDQVGTLNEAGIRAAYLNSSLSYAQYRKALSLARGYTYKIIYVAPERLMSD
EFLSFAKEMKISMVCVDEAHCVSQWGQDFRPHYLHIREFLKEMPQRPIVSAFTATATTQV
KEDILQLLDMKDPYTITTGFERKNLYFAVEKPKDKYQALLHYVKQHTEDAGIVYCLSRKT
VEEVCDRLCADGFAATRYHAGLSDAERMNNQDDFIYDRKTIMVATNAFGMGIDKSNVRFV
VHFNMPKNMESYYQEAGRAGRDGEQADCILLYSGKDVRLNQFLIEQGSGHEDMEEAVRME
LQQKEKERLKSMTFYCTIPSCLRHYMLKYFGEESDGFCGSCSNCLTQYEECDIRMEASRL
VECIRHSGERFGKTMIVDIVKGSANAKIKSYHLDRNPAYGSLKDSSRNHLYEILQHLQFQ
GILKQSEDGYSVLSIHQEELLPTDGPLIMKIVKEKQVQTPVVQTDSGDNRLFELLRICRS
QLARKAHVPPYMVFSDKTLHDMCAKAPHSREEMLGVSGVGEVKYDKYGEAFLKVIASFDS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggattatgaggttttaaaaaaatatttcggttatgaaagctttcgtgaaggt
cagcaggagctgataacaaatattctggagcgccatgatgtgttgggaatcatgccaacc
ggggcaggtaaatctatctgctatcaggtcccggccgtgatgctggagggaatcacactg
gttatctctcctttgatttctctgatgaaggatcaggtgggaaccttaaacgaagctgga
attcgtgcagcgtatttaaacagctccctatcctatgcccagtatcgcaaggcactttct
ctcgctcgcggatatacctataagatcatatatgtagctccggaaagactgatgagcgat
gaatttttaagctttgcaaaagagatgaaaatctccatggtatgtgtggatgaggcgcac
tgtgtcagccagtgggggcaggattttcgaccgcattatttacatattcgggagttctta
aaggaaatgccgcagcgaccgattgtttctgcatttactgcaacggcaaccacacaggta
aaggaagatattcttcagctgctggatatgaaggatccttataccataacgacaggcttt
gaacgtaagaatttgtactttgctgtggaaaagccgaaggataaataccaggcacttctg
cattatgtaaaacagcatacggaggatgcgggcattgtctactgtctgtcaagaaaaaca
gtggaggaggtctgtgatcgactatgcgccgatggctttgcggcaacacgctatcatgcc
ggtctgagcgatgcagagcgtatgaataatcaggatgatttcatctatgacagaaaaacc
atcatggtcgcaaccaatgcgtttggaatggggattgataaatccaatgtgcggtttgtc
gttcatttcaatatgcctaaaaatatggaaagctattatcaggaggcgggaagagccggg
cgtgacggggaacaggcagattgtatcttgctgtacagcggcaaggatgtccgtttgaat
cagtttttgattgaacagggaagcggtcatgaggatatggaagaggctgttcgcatggag
ctgcagcaaaaggaaaaggaacggttgaaatccatgaccttctattgtacgattcccagc
tgtcttcgtcattacatgttaaaatacttcggtgaggaaagtgatggcttctgcggtagc
tgctcaaactgtctgacacaatatgaggaatgtgatatccgtatggaagcatcccgtctt
gtggaatgtatccgtcacagcggagaacgcttcgggaaaacgatgattgtagatattgtt
aagggcagtgcgaacgccaaaatcaaaagctatcatctggatagaaatccggcttatggt
tcgttgaaggacagctcacgcaatcatctttatgaaatccttcagcatctgcaatttcag
ggtatcctgaaacagagtgaggacggctattcggtactgtcgattcatcaggaggagctg
cttcctacagatggtccgctgataatgaaaattgtcaaggagaagcaggtgcagacccct
gtggtacagacagatagtggcgataaccggctgtttgaattgctgagaatctgccgttcc
cagctggcacgaaaagcccatgttcctccgtacatggttttctccgataagacactgcat
gatatgtgtgcgaaagcaccgcattcaagagaagaaatgctgggagtcagcggtgtcggt
gaagtgaaatatgataagtacggagaagcctttttaaaggtcatcgcatcctttgactca
taa
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