Clostridium innocuum: G4D55_03870
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Entry
G4D55_03870 CDS
T06525
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ciu
Clostridium innocuum
Pathway
ciu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G4D55_03870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ciu03021
]
G4D55_03870
03400 DNA repair and recombination proteins [BR:
ciu03400
]
G4D55_03870
Enzymes [BR:
ciu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G4D55_03870
Transcription machinery [BR:
ciu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G4D55_03870
DNA repair and recombination proteins [BR:
ciu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G4D55_03870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
zf-C4H2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIX08261
LinkDB
All DBs
Position
776955..777914
Genome browser
AA seq
319 aa
AA seq
DB search
MQKFERAHFEVKEYDESQHYGKFVFEPLERGFGTTIGNALRRVLLSSLPGAAVFSIKVDG
VYHEFTSIPGIVEDVTAIILNIKTLVMSIQDDEIYTLRISKQGPGAVTGADIICPEGVEV
ISKDLHICTLEEGGMLEMELQARIGRGYVSADTNKQLYQTPNQPLGIIYTDSIYTPIEKV
SYNVEPTRVGQDAHYDKVALEIWTDSSLSPAEAVALASKILIDHLELLTNVHEAVNDMES
VMKEAQGEVQNKGLVMMIEDLDLSVRSYNCLKRAGIQTVEELTQRTEDEMMRVRNLGKKS
LKEVKDKIYDLGLSFKSYE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaattcgaacgtgcacattttgaagtaaaagaatatgatgaatctcaacattac
gggaagtttgtgtttgaacctttggaaagaggttttggtacaaccattggaaatgcacta
agacgtgttttgctctcctctttaccgggagctgccgtattttcaattaaagttgatggt
gtttaccacgagttcacttcaattcctggaattgtagaggacgtaacggcaatcatttta
aatatcaaaacccttgtgatgagtattcaggatgatgaaatttataccctgcgtatctca
aaacagggtccaggcgcagtaaccggtgctgatatcatttgcccggaaggtgtggaggta
ataagcaaggacttgcacatctgtacactggaagagggcggaatgctggaaatggaactg
caggctcgtattggtcgcgggtacgtgagtgctgacacaaacaagcagctgtaccagaca
ccaaatcagcctctgggaatcatttacacagattcaatttatacaccaatcgaaaaggta
tcctataatgtggagccgactcgtgttggacaggatgctcactatgacaaggttgctctg
gaaatctggacagactcttcactgagtcctgcagaagccgtagcacttgccagcaaaatt
ctgatcgaccatctggagctgctgacgaatgttcacgaagcagtaaacgatatggaatcc
gtgatgaaggaagcacagggtgaggtacagaataagggacttgtcatgatgattgaagac
cttgacttatccgtacgttcctataactgtttgaagcgtgcaggaatccagactgtggag
gaactgacgcagagaacagaggatgaaatgatgcgtgtaagaaacctgggtaagaaatca
ttaaaggaagttaaagataagatctatgatttgggactgagtttcaagtcatacgaataa
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