Clostridium innocuum: G4D55_05680
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Entry
G4D55_05680 CDS
T06525
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ciu
Clostridium innocuum
Pathway
ciu00470
D-Amino acid metabolism
ciu00550
Peptidoglycan biosynthesis
ciu01100
Metabolic pathways
ciu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G4D55_05680
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G4D55_05680
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
G4D55_05680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
G4D55_05680
Enzymes [BR:
ciu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
G4D55_05680
Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
Precursor biosynthesis
Amino acid ligase
G4D55_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
GARS_A
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QIX08592
LinkDB
All DBs
Position
1168729..1169883
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AA seq
384 aa
AA seq
DB search
MKLKIAVAFGGRSVEHEISVLSAQQVMAALDEERYEILPLYIAKDGRMFCEEELRELETF
QHIEEFIADHTSVALIRRDAHTYLIPSRRKLFARDKEVDLVFPVLHGTNGEDGTFQGYLK
TIGIPYVGCSVLAGAIGQDKVIMKQVLQDSGLSVVPWFFWTLHQPMEQSFFKKAQRLGYP
LIIKPANLGSSVGIAVAHNDVELHKSMIEAFQYDHKVVIEKVIEPLREINASVLGDEDGC
RCSTLEEVVKQDEILSYDNKYSGQGKSKGMLSTSRKLPAELSDEQAEEVRTMAMDAFRAL
NAAGVVRIDFLMHADSSALYVNEINTIPGSLSFYLWEKEGLSFPALLDELISLALQRVRR
EQKMIFSYDTNILRDYKGIGKLMK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaaattgccgtggcatttggcggcagaagtgtagaacatgaaatcagtgtc
ctgtcggctcagcaggtaatggctgctctggatgaggagcgctatgaaatactgccgttg
tatattgccaaggatggcagaatgttttgtgaggaggaattacgggagctggaaaccttt
cagcatattgaagaattcatagcggatcataccagtgtagctctgattcgaagagatgcg
catacctacttgattccatcgcgtcgtaaattatttgccagagataaggaggttgatctg
gtgttcccggttctgcatggaaccaatggggaagacggcacctttcagggatatctgaaa
acgatcgggataccctatgtcggctgcagtgttctggcaggcgcaatcggacaggataag
gtgattatgaagcaggtattgcaggatagcgggctttcggttgtaccgtggtttttctgg
acattgcatcagccgatggagcagtcctttttcaaaaaagcgcagcgtcttggttatccg
ctcatcattaagcctgcgaatctgggcagcagtgtcggcatcgccgttgcccacaatgat
gtggagctgcataaaagcatgatcgaggcctttcagtatgatcacaaggttgtgattgaa
aaggtgattgaaccgctgcgggaaatcaacgcctcggtactgggggatgaggacggctgt
cgctgcagtacactggaagaagttgtcaagcaggatgaaattctgtcttatgacaacaag
tacagcggacagggtaaatccaagggaatgctcagtaccagccggaagctgccggcagag
cttagtgatgagcaggctgaggaggttcgcacgatggcgatggatgccttccgtgcgctg
aatgcggcaggggtcgtgcggattgattttctgatgcatgcagacagttcagctctatat
gtgaatgaaatcaatacgattcctggctccctgtccttctatttgtgggaaaaggaaggt
ctttcctttcctgccctgctggatgagctgatctcgctagcacttcagcgggtacgcagg
gaacagaagatgattttcagctatgacacaaatattctgcgggattataagggcatagga
aaactgatgaagtag
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