Clostridium innocuum: G4D55_07590
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Entry
G4D55_07590 CDS
T06525
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ciu
Clostridium innocuum
Pathway
ciu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G4D55_07590 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciu03400
]
G4D55_07590 (priA)
Enzymes [BR:
ciu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4D55_07590 (priA)
DNA repair and recombination proteins [BR:
ciu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G4D55_07590 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
nSTAND3
Zn_ribbon_6
AAA_16
AAA_25
AAA_19
SRP54
DUF3638
AAA_22
HypA
T2SSE
TrwB_AAD_bind
PhoH
IBR_1
TsaE
SLFN-g3_helicase
Zeta_toxin
Zn_ribbon_IS1595
AAA_11
Zn_ribbon_15
AAA_5
Glycos_transf_2
ABC_tran
CbiA
zf-Sec23_Sec24
DUF951
Motif
Other DBs
NCBI-ProteinID:
QIX08931
LinkDB
All DBs
Position
1575733..1577901
Genome browser
AA seq
722 aa
AA seq
DB search
MKIAQVFVEHPIMHLDHTFTYACDGFSVQRGVRVQVPFGKTSIIGFVMQVETITEQQAAG
YGFTIRPIDKVIDEEPLLNEELFALGEWMAKTCIVPMISCFQCMLPAKLKPKSTHGHAKR
EAWIRYVKDGDGLTVKQRAALQALQEEKEMLRSQFYQIYKTPGKKLVELGLAQVYEKEVQ
ARLLSKEITQQDLPLHPEQQQALHILQKVSGHEVVLLHGATGSGKTEVFLQLARSVMQQG
KQVLILVPEISLTPQMVNRVTARFGSHVAIYHSGLNAQEKYEQYQLVRRHQVQIVVGTRS
AVFMPFDNLGVIIMDEEHDTSYKQDSSPRYHCRDIALQRGRHHHALVVLASATPSLETYA
RAIKGVYRLIEMPSRINGSFPDVKLVEMRKAVGRGESYLLSNELLAAMYERLQRKEQILL
LLNRRGYTPILRCIGCGHVVMCPHCEVAMSYHKDDKQLKCHTCGYTMPVPNYCPECGSDT
WRYLGLGTQKLEELVQIKFPDARIIRMDADTTGKKNAHEELLAAFGEHRADILMGTQMIA
KGLDFENVTLVGIINGDAMLNRSDYRSAELTYDLLEQAVGRSGRGAKAGEVIIQAYDTTH
YAIQCAAHHDYRAFFQNEMKYRHIAGYPPYTYLASMIFSHTSPEEVAKAAARAKKLLEAH
AGYRILGPAQLTKRKDEMRMRILLKGKQQELLGQCVREVYDAHLAAKEKARLDIDVSPVA
LD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcacaggtatttgttgaacatcccatcatgcatctggaccatacctttacc
tatgcctgcgacggcttttctgtacagcggggagttcgtgtacaggtgccattcgggaaa
acctcgattatcggctttgttatgcaggtggaaacgatcacggagcagcaggctgccgga
tacggcttcaccatacgtccgattgacaaggtgattgatgaggaaccgctgctgaatgag
gagctgtttgctctcggtgaatggatggcgaaaacctgtatcgtaccgatgatcagctgc
ttccagtgcatgcttccggcaaagctgaaaccaaaatcaacgcatggacatgcaaagagg
gaagcctggatacgttatgtgaaagatggggatgggctgacggtaaagcagcgtgccgca
ttacaggcactgcaggaagaaaaggaaatgcttcgctcacagttttatcagatttataaa
acacctggtaaaaagctggtagagctcgggctggcacaggtatatgaaaaagaagtgcag
gcacgacttttgtcaaaggaaatcacacagcaggatctgccccttcacccggagcagcaa
caggcgctgcatatcctgcagaaggtaagcgggcatgaggttgttttactgcatggtgcg
accggcagtgggaaaacagaggtgtttctgcagctggcaaggtctgtcatgcagcaggga
aagcaggttctgattctggtaccggaaatctctttgactccgcagatggtaaaccgggta
acggcgcgctttggaagtcatgtggcaatttatcattccggattgaatgcacaggagaaa
tacgagcagtatcagcttgtccgccggcatcaggtgcagatcgtggtcggtacacgcagt
gcggtttttatgccgtttgataatctgggtgtcatcatcatggatgaagagcacgatacc
agctataagcaggattcctctccacgctatcattgtcgcgatatcgctttgcaaagagga
agacatcatcatgcgctggtcgttttggcaagtgccacgccttctctggaaacctatgct
agagcaattaagggggtttatcggctgattgaaatgccaagccgcatcaatggcagcttt
ccggatgtaaagctggtggaaatgcgcaaggcggtcggtcggggagagagctatctgctg
agcaatgagctgctggctgcaatgtatgagcggctgcaaagaaaggaacagatacttctg
cttctgaatcgcagaggctatacaccgatccttcgctgtatcggctgcggccatgtcgta
atgtgtccgcactgtgaggtggcgatgtcctatcacaaggatgataaacagctgaaatgc
catacctgcggatatacgatgccggtaccgaattactgtcccgaatgcggcagtgatacc
tggcggtatctcgggctgggtacgcaaaagctggaggagcttgttcagatcaaatttccg
gatgccaggattattcgcatggatgcggatacgacagggaaaaaaaatgcccacgaggag
ctgctggctgcctttggtgagcacagggcggatattcttatgggaacacagatgattgca
aaggggctggattttgaaaatgtgacactggttggtatcatcaacggggatgccatgctg
aatcgcagtgattatcgcagtgcagagctgacctacgatctgctggagcaggcggtggga
agaagcgggcgcggtgccaaggcgggggaggtcattattcaggcatacgatacaacacat
tatgccatacagtgtgcggcgcaccatgattatcgagccttttttcagaacgaaatgaaa
taccggcatattgcaggctatccaccgtatacctatctggcctccatgattttttcccat
acctcaccggaggaggtcgcaaaggctgccgccagagcaaaaaagctgctggaagcgcat
gcgggatatcgaattctgggaccggcacagctgacaaagcgcaaggatgagatgcgtatg
cgcatcctgctgaagggaaaacagcaggagctgctggggcaatgtgtccgagaggtttat
gatgcacatctcgccgcaaaggaaaaggccagactggatatcgatgtatctccggtcgcg
ctggattaa
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integrated database retrieval system
