Clostridium innocuum: G4D55_08145
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Entry
G4D55_08145 CDS
T06525
Name
(GenBank) response regulator transcription factor
KO
K07667
two-component system, OmpR family, KDP operon response regulator KdpE
Organism
ciu
Clostridium innocuum
Pathway
ciu02020
Two-component system
ciu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G4D55_08145
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G4D55_08145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ciu02022
]
G4D55_08145
Two-component system [BR:
ciu02022
]
OmpR family
KdpD-KdpE (potassium transport)
G4D55_08145
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QIX09032
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Position
1696894..1697577
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AA seq
227 aa
AA seq
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MHDKILLIEDDASIIRFLSLSLDKNGYKVIEARNGIEGISLFMSDNPDLILLDLGLPDID
GSEVLRQIRSQSEVPILVVSARGQEREKVEALDLGADDYVTKPFHINELLARVRVALRKK
TPRVVKEKVFVLDGLRVDFEKYKVYVEDREVHLTPIEFKLLVLLIEHAGKVLTHSFIIRN
IWGYSSCEDSQSLRVFMANIRRKIEKDSSHPRYILTEVGVGYRFVDE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcatgataaaatattgctgattgaggatgatgccagcattatccgatttctaagcctg
tctctggataagaacggatataaggtgatagaggcacgaaacggcattgagggaatttca
ttattcatgagcgataatccggatttgattctgctcgatctgggactgccggatatcgac
ggcagcgaggtgctgcgtcagattcgttcccaaagcgaggtgccgattctggtagtatct
gccagagggcaggaaagggaaaaggtggaggcactggatcttggggcggatgattatgtt
accaagccctttcatatcaatgagctgcttgccagagtacgggtggcactgcgcaagaaa
acaccgcgtgttgttaaggaaaaggtgtttgtgctggatggtctgcgggtggattttgaa
aaatacaaggtctatgtggaggaccgggaggtgcatctgacaccaatcgagtttaagctt
ctggtgttactgattgagcatgcgggcaaggtgctgacccacagctttatcatccgtaat
atctgggggtacagctcctgtgaggattcacaatccctgcgtgtctttatggcaaatatc
cgcagaaaaattgaaaaggacagctcacatccccgctatatactgacagaggtaggcgta
ggatatcgttttgtcgatgaatga
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