KEGG   Clostridium innocuum: G4D55_08730
Entry
G4D55_08730       CDS       T06525                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ciu  Clostridium innocuum
Pathway
ciu03030  DNA replication
ciu03410  Base excision repair
ciu03420  Nucleotide excision repair
ciu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ciu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G4D55_08730 (polA)
   03410 Base excision repair
    G4D55_08730 (polA)
   03420 Nucleotide excision repair
    G4D55_08730 (polA)
   03440 Homologous recombination
    G4D55_08730 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ciu03032]
    G4D55_08730 (polA)
   03400 DNA repair and recombination proteins [BR:ciu03400]
    G4D55_08730 (polA)
Enzymes [BR:ciu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G4D55_08730 (polA)
DNA replication proteins [BR:ciu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     G4D55_08730 (polA)
DNA repair and recombination proteins [BR:ciu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     G4D55_08730 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G4D55_08730 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5
Other DBs
NCBI-ProteinID: QIX09141
LinkDB
Position
1815048..1817633
AA seq 861 aa
MKKLLLIDGNSMLFRAYYATVYGRMMKTSNGVPTNAVYGFITMINKALSMVEPDAVLVAW
DAGKSTFRHETYTEYKGTRKELDQELIVQFPIAREFLDAYGMKRYECEGIEADDIIGSMA
KKYPDVEIHILSSDRDLLQLIDPTTDVYLMKKGITEMEVMDEAKLKESMGIVPSQIIDLK
ALMGDTADNIPGVKGIGEKTALKLLSEYETVDNVYAHIDEIKGKLKEKLETDKEKAFLSK
YLATIKVDAEIPLPFADMMLKEPGEELHDFFVKYEMKSFVKETMDTREVKKEGSRTIVKQ
ISPDLLQDGALVYANVDNESYYDAQLYGFAISLQDRTEYIELSDALQDTAFLEWLKEENG
KAVYDAKNFYHALHKNNIPFADVTFDVMIAAFLVDGTLSDYDKLAEKYQFDRSLLKDDVF
GKKGKGKLVDSDEAARYAMAQADYLQDLVAKLDTALREMEMKELFTTIEMPLTHVLYAME
KEGVVTSLSTLDEIAKATSDKIDALSAKIYEIAGMEFNINSPKQLAGILYDELGLKAGKK
RSTAADVLEKLASQHPMIPLLLEHRKYQKIYSTYAVGLSKHVLKDGKIHTIFNQIQTQTG
RLSSSEPNLQNISVRDEEGKEIRKAFVASEGHVLLSADYSQIELRMLAHMANEEVMIDAF
NHGIDIHTKTAMQIFDVEHDAVDANMRRSAKTVNFGIVYGQSDFGLSEQLGITRKEAHAF
IDKYFASYPNIKSFMDTTIAFCEEHGYVKTLFNRRRYIKEISDKNYMMREFGKRAAMNAP
IQGSAADLIKLAMIHIYKKMQEEQVKSRMILQIHDELIFDVWEEELEQMRTIVEEGMQHA
MKLRVPLIAEANIGRTWYDAK
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgaaaaaacttttactgattgatggaaattccatgctgtttcgtgcatactacgcgaca
gtatatggaagaatgatgaaaacgagcaatggtgtgccgaccaatgcagtatatggcttt
attacgatgatcaacaaggcgctgtccatggtggagccggatgcggtgctggtcgcatgg
gatgcaggcaagtcgacctttcggcatgagacgtataccgaatataagggaaccagaaaa
gaactggatcaggagctgatcgtacagtttccgattgcccgtgaatttctggatgcctat
ggcatgaagcgctatgaatgcgagggtattgaggcggatgatatcatcggaagtatggca
aagaaatatccggatgtggaaatacatatcttatccagtgaccgtgacctgctacagctg
attgatccgacaacggatgtctatctgatgaaaaagggtatcacggaaatggaagtcatg
gatgaggcaaagctgaaggaaagcatgggaatcgtaccctcacagattattgatctgaag
gcactgatgggagataccgcggataacataccgggcgtgaagggcatcggtgaaaagacg
gcactcaagcttttaagtgaatatgaaaccgtggataatgtgtatgcacatatcgatgaa
atcaagggcaagctgaaggaaaagctggaaacggataaggaaaaggcatttttatccaag
tatctagcgacgatcaaggtggatgccgaaattccgctcccctttgcggatatgatgctg
aaggagccgggggaagagctgcacgatttctttgtgaaatatgaaatgaagagctttgta
aaggaaaccatggataccagagaggtgaaaaaggaaggcagccgcacgattgtgaagcag
atttcgcctgatcttttacaggatggggcactggtgtatgccaatgtggataatgaaagc
tattatgatgcacagctgtatggctttgccatcagtctgcaggatcgcaccgagtacata
gagctgtcagacgccttgcaggatacagcatttctggaatggctgaaagaagaaaacggc
aaggcggtatatgatgcgaaaaacttctatcacgccctgcataaaaacaacattcccttt
gcggatgttacattcgatgtcatgattgcggcattcctggtggatggaacgctgtcagat
tacgataagctggcggagaagtatcagtttgaccgcagtctgttaaaggatgatgtattc
ggtaaaaagggcaagggaaagctggtggacagtgacgaggctgcccgctatgccatggcg
caggccgattatttacaggatctggttgccaaactggatacagcgttacgggaaatggaa
atgaaggagctgtttactaccattgaaatgccgctgacgcatgtgctgtacgcgatggaa
aaggaaggggttgttaccagcctttccactctggatgaaatcgcaaaggcgaccagtgat
aaaatcgatgccctgagtgcaaagatatacgagattgccggtatggaattcaatatcaat
tctccgaagcagctcgccggtattctgtatgatgagcttggcttaaaggcaggaaagaag
cgcagcactgcagcggatgtactggaaaagctggcatctcagcatccgatgattccgctt
ctgctggagcatcgcaagtatcagaaaatctattccacctatgcggttggcttaagcaaa
cacgttttaaaggatggtaagattcatacgattttcaatcagattcagacacagaccggc
cgcttgtcctcctcggaaccaaacctgcagaatatttccgtgcgggatgaggagggaaag
gagattcgcaaggcgtttgtcgccagtgagggacatgtgctgctgtctgcggattattcc
cagattgagctgcgtatgctggcacatatggcgaatgaagaggtgatgatcgatgccttt
aaccatggcattgatattcatacaaaaacggcgatgcagatattcgatgtggaacacgat
gccgtggatgccaatatgcgcaggagtgcgaaaacggtaaacttcggcattgtttacgga
cagagcgatttcggattgagtgagcagttgggcattacccgcaaggaggcacatgccttt
attgataaatattttgcatcctatccgaatattaaaagctttatggatacgacgatagca
ttttgcgaggagcatggctatgtgaaaacgctgttcaaccgccgccgctatatcaaggaa
atcagcgataagaattatatgatgcgggaattcggaaagcgtgcggctatgaatgcaccg
attcagggaagtgctgccgatttgatcaagcttgccatgattcatatatataagaaaatg
caggaggaacaggtgaaatcccgtatgattctgcagattcatgatgaattgatttttgat
gtctgggaagaggaactggaacagatgagaaccattgtcgaggagggcatgcagcatgcg
atgaagctgcgtgtaccgctgattgccgaggcgaatatcggcaggacctggtatgatgca
aagtag

DBGET integrated database retrieval system