Clostridium innocuum: G4D55_10335
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Entry
G4D55_10335 CDS
T06525
Symbol
pepV
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ciu
Clostridium innocuum
Pathway
ciu00300
Lysine biosynthesis
ciu01100
Metabolic pathways
ciu01120
Microbial metabolism in diverse environments
ciu01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G4D55_10335 (pepV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ciu01002
]
G4D55_10335 (pepV)
Enzymes [BR:
ciu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
G4D55_10335 (pepV)
Peptidases and inhibitors [BR:
ciu01002
]
Metallo peptidases
Family M20
G4D55_10335 (pepV)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QIX09444
LinkDB
All DBs
Position
2148079..2149470
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AA seq
463 aa
AA seq
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MNWLTELETYKDAFIQDLRGLIAIPSVRDDKTKTANAPFGAGCRKALDYMLELGKREGFQ
IKDYDGYAGVIAYGEGEESVGVLAHLDIVPIGEGWSRDPFGGDIVNGYMFGRGTLDDKGP
AMAGFYALKMLKDKGIKLNRKVMLILGCDEESGMECMNYYTKHGELPTLGFTPDADFPVI
YGEKGGLHVELSGTCDTVITSMHAGERSNIVIGQASAQVRDWKEEYLDAFLYYLRAFDLK
GSVETLDNESAVLHMEGVFAHAAMPYNGVNAALHLLNFIGCTYGDKFAHDTYTMLKDWQG
KPLGIDIDGAYMGFLTMNTGIVNIEHNEASIVIDIRYPNDADPKRIMKGFTDTAKKLDYA
LDVTLKKNTKPLFVDPDSKLVQTLSSVYRDYTHDTFTPNMTIGGGTYAKKFDNFVAFGPE
LPNREQPKDMFIGGCHQKDEAIRVEDLLRAVAIYTAAVEQLAK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaactggttaacggaattggaaacgtacaaggatgcgtttatccaagacctgagaggt
ctgattgccattccttctgtgcgggatgacaaaacaaagacagccaatgcaccgtttggg
gcaggctgtagaaaagcactggattatatgctggaacttgggaaaagagaaggctttcag
ataaaggattacgacggctatgccggtgtgattgcatatggggaaggggaagaaagcgtc
ggtgtgctggcgcatttggacattgtgccgatcggtgaaggctggagcagagatcccttt
ggcggtgacatcgtgaacggctacatgttcggacgcggaacactggatgataaaggccct
gccatggctggcttttatgcgcttaaaatgctgaaggataagggaatcaagctgaaccgc
aaggtcatgctgattctgggctgtgatgaagaaagcggcatggagtgcatgaattactat
acaaagcatggtgagcttcctaccctgggctttacaccggatgcggatttcccggttatc
tatggagaaaagggcggcttgcatgtggaactgagcggaacgtgtgataccgtaattaca
agtatgcatgcgggagagcgcagcaatatcgtaatcggacaggcaagtgcccaggttagg
gactggaaggaagaatatctggatgcctttctgtactatttacgggcctttgatttaaaa
ggaagcgtggaaactctggacaatgagagtgctgttctgcatatggaaggggtctttgca
catgcggctatgccatacaacggcgtaaatgcggcattgcatctgttaaacttcattggc
tgtacctatggtgataaatttgcacacgatacctataccatgctgaaggactggcaggga
aaaccgctgggcatcgatatagatggtgcctacatgggctttttgaccatgaataccggt
attgtaaacattgaacataacgaggcaagcattgtcattgacatccgctatccaaacgat
gcagatccaaagcgcatcatgaagggctttaccgatacggcgaagaagcttgattacgca
ctggatgtaacgctgaagaaaaacacgaagccgctgtttgtggatccggattcaaagctg
gtccagaccttgagcagtgtctatcgggattacacccatgatacctttacgccgaatatg
acaatcggcggtggaacatatgcaaagaaatttgataattttgtagcatttggtccagaa
ttaccaaatagggagcagccaaaggatatgtttatcggcggctgccaccagaaggatgag
gcaatacgggtggaagatttgttaagagcggttgccatctataccgctgccgtagagcag
cttgcgaaataa
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