Clostridium innocuum: G4D55_10675
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Entry
G4D55_10675 CDS
T06525
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ciu
Clostridium innocuum
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ciu03016
]
G4D55_10675 (truB)
Enzymes [BR:
ciu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G4D55_10675 (truB)
Transfer RNA biogenesis [BR:
ciu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G4D55_10675 (truB)
Prokaryotic type
G4D55_10675 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Mu-transpos_C_2
zf-CHY
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QIX09510
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All DBs
Position
2214169..2214999
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AA seq
276 aa
AA seq
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MDGILLINKEQNMTSHDVVARLRRILHTTKIGHSGTLDPNATGVLLVLIGKACKALPFLE
DTDKEYIATLQLGIQTISDDIWMEPLKEAPIQPIADFQSVLDSFRGVQKQVPPMISSVRV
NGRKLYEYAREGIAVTRPEREVTIYDIEALDTQKLQFRVSCSSGTYVRSLCHDIAQKTGN
LGCMSSLVRTKVGRFSLDECVTLQDVQEGCFQLHTLQEVLSHYEPVEYERPADIYNGKKI
TLRCEADDVAITHNGNIVAIYQREDAAVFRCVRGLW
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggacggtattttactaataaacaaggaacagaatatgacctcgcatgatgtggtggca
cgtctgcgaaggattttacatacaacgaaaatcggacacagcggtacactggatccgaat
gcgaccggcgtgcttctggttttgattggcaaggcctgcaaggcgctgccgtttctggag
gatacggacaaggagtatattgcgacgctgcagttgggcattcagacgatcagtgatgat
atctggatggagccgctgaaggaagcgccgatacagccgattgcggatttccaatcggtt
ctggacagctttcgcggtgtacagaagcaggtaccgccgatgatatccagtgtccgggtg
aacggaagaaagctttatgaatatgcacgggaagggatagcagtaacgcgtccagagcgt
gaggtaaccatatatgatattgaagcgctggatacgcagaagctgcagtttcgggtcagc
tgcagctccggaacctatgtgcgttccctgtgccatgacatcgcacagaaaacaggaaat
ctgggatgtatgtcttcgctggtacgtacaaaggtagggcggttttcccttgatgaatgc
gttactctgcaggatgttcaggaaggctgttttcagctgcatacgctgcaggaggtgctt
tcccattatgaaccggtggaatatgaacggcctgcggatatttataatggaaagaaaatc
acactaaggtgcgaggcggatgatgttgccattacccacaacgggaacattgttgctata
tatcagcgtgaggatgcggcagtatttcgctgtgtccgcggcttatggtag
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