Clostridium innocuum: G4D55_10965
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Entry
G4D55_10965 CDS
T06525
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ciu
Clostridium innocuum
Pathway
ciu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
G4D55_10965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciu03400
]
G4D55_10965
Enzymes [BR:
ciu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
G4D55_10965
DNA repair and recombination proteins [BR:
ciu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
G4D55_10965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QIX09566
LinkDB
All DBs
Position
complement(2266525..2267406)
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AA seq
293 aa
AA seq
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MKLGCHVSMSAPDYVLGSVKEAISYGANAFMLYTGAPQNTRRKAMHELKIEEAHSLMKEH
GIDEGSMIVHAPYIINLANCVREVTFALGVEFLQKEIARVQALHATVLVLHPGSHVKAGE
EEGLKKIVEGLDLAMQDVQDVQISIETMAGKGSEIGYSFAHIRYLMDHAKYGDRLRVCLD
TCHIHDAGYDLSDFDKVLDEFDAVIGLERLACMHINDSKNVQGARKDRHANIGFGEIGFE
KLNAIVHNERVKDVVKILETPYVEDHPPYRQEIAMLRSGVFDEQIMEKIKGDI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgggctgtcatgtttccatgtctgcgccggattatgtgctgggatcggtaaaa
gaagcaatcagctatggcgccaatgcgtttatgctgtataccggtgcaccgcagaataca
cgacgcaaagcaatgcacgaactgaaaatagaggaagcacacagcctgatgaaggagcat
gggattgacgaaggcagtatgattgtgcatgcgccctatatcatcaatctggcaaactgt
gtacgggaagtgacctttgcgctgggcgtggagtttttacaaaaggaaatagctcgcgta
caggcgctgcatgcaacggttctggtgctgcaccccggaagtcatgtgaaggccggagaa
gaagaaggtctcaagaaaatcgttgagggtctggatctggcaatgcaggatgtacaggat
gttcagatttccattgaaacaatggccggcaagggcagtgaaatcggttatagctttgcg
catatccgttatctgatggatcatgcaaaatacggtgatcgtctgcgtgtctgtctggat
acctgtcatattcatgatgccggctatgatctgtccgactttgacaaggtgctggatgaa
tttgacgctgttatcggtctggaacgtctggcctgtatgcatatcaatgattccaaaaat
gtacagggagcacgtaaggaccggcatgcgaatatcggctttggcgaaatcggttttgaa
aagctgaatgccattgtacataatgaacgtgtaaaggatgttgtaaagatcttggaaaca
ccgtatgttgaggatcatccgccataccgtcaggaaatcgccatgttgagaagcggtgtg
tttgatgaacagattatggagaaaatcaagggagacatctga
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