Clostridium innocuum: G4D55_11635
Help
Entry
G4D55_11635 CDS
T06525
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ciu
Clostridium innocuum
Pathway
ciu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
G4D55_11635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciu03400
]
G4D55_11635
Enzymes [BR:
ciu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
G4D55_11635
DNA repair and recombination proteins [BR:
ciu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
G4D55_11635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
HHH_5
AAA_12
nSTAND3
PIF1
NPHP3_N
AAA
AAA_28
UvrD_C
AAA_16
NTPase_1
AAA_14
AAA_5
TsaE
Motif
Other DBs
NCBI-ProteinID:
QIX09695
LinkDB
All DBs
Position
complement(2402305..2404476)
Genome browser
AA seq
723 aa
AA seq
DB search
MDEEEIILKAKHLHTIFRNDTNGYTVAKFVTYDANEEDFTATGYFSELNEDVLYKLHGDY
VDHPRYGMQFQVAAYEKMMPNDESTLIRYFSSSLFPGIGVQTAKSIVEALGEDAIEIIKE
NPETLKQITTLNARKRASIIQGIMEHEEADDSVVFFTRMGISVKTIMKMEAAYGEAMISM
VKENPYRLIEEIDGIGFKTADKLAKELAFAEDHPYRIKAVILSCVLDLCMASGDTYTTLE
QIQKRFCKEFDASVEIAPYLEELELDRLIMIEDGRIYHHTQYDAQNGIASFLAGFPYRES
EEEVSFDVEDIGIMEQKFHIRYEDKQKEAITAFFKEPFLILTGGPGTGKTTIVKGILDLY
QRYYPSDTIALCAPTGRAAKRLSELSSTAATTIHSLLKWDLETNTFLVNDKDPIQADLLI
IDEFSMVDQWLFYHLLRACRMVKRIVVIGDEDQLPSVGCGCVLKDLIESACFPLVRLNKI
FRQSEGSDVVTLAHQIREGSADILDHAKDIAFFPCQNYEVRDLILSVVSNALDKGYDPKE
IQVLAPMYGGVAGIDALNNALQKMMNPSDSYKKELKVGYRLFREHDKILQLKNQPEDEVY
NGDIGEIIEISYRDDNVHQKNCITADFDGVLVEYSGEQIYNITHAYATSIHKAQGSEYAI
VIMPIVKDYRYMLQKRLIYTGVTRAKRSLVLLGDKEVFLHALRVEDRHVRRSTLQEKIKE
MMG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagaaatcatattgaaagcaaagcatctgcatacaatttttcgcaatgat
accaatggatataccgttgcgaaatttgttacctatgatgcaaacgaagaagattttaca
gcaaccggatatttcagtgagctgaatgaggatgtgctgtacaagctgcatggggattat
gtggatcatccccgctatggaatgcagtttcaggttgcggcctatgagaaaatgatgccg
aacgatgaaagtacactgatccgttatttttccagctctctgtttcccggaataggagtg
cagacagcgaagtccatcgtagaagcgcttggagaggatgccatcgaaatcataaaagaa
aatccggagactttgaaacagattacaacgttaaacgcaagaaagcgtgcctccatcatt
cagggaatcatggagcatgaagaggcagatgactctgttgttttctttacgcgaatggga
atcagtgtcaaaaccatcatgaagatggaggctgcctatggcgaagcgatgatttccatg
gttaaggaaaacccataccgtctgattgaggaaatcgacgggatcggctttaaaactgcg
gataagctggcaaaggagctggcgtttgcggaggatcatccctaccgcatcaaggctgtc
atattatcctgtgtgctggatttatgtatggcaagcggggatacctatacaacgctggaa
cagatacagaaacggttctgtaaggaatttgatgcatctgtggagattgctccctatctg
gaggagctggagctggatcgcctgatcatgattgaggatggccgcatatatcatcataca
caatatgatgcgcaaaacggcattgcttcctttcttgctgggtttccttatcgtgagtca
gaagaggaagtttcatttgatgtagaggatatcgggattatggaacaaaaatttcatatc
cgctatgaagataaacagaaggaggcgattactgcctttttcaaagagccctttctgatt
ctgacaggcggaccgggaaccggaaaaacgacgattgtaaagggtatcctggatttatat
cagcgctactatccatccgatacaatagcgctgtgtgctccgaccggacgggcagccaaa
cggctgagtgagctgagctcaacggcggcaacgacgattcactccctgctgaagtgggat
ttggaaacgaacacctttctggtgaacgacaaggacccgattcaggctgatttactgatt
attgacgaattttccatggtggatcagtggctgttctatcacctgctgagagcctgccgc
atggtgaaaagaattgttgtgattggagatgaggatcagctgcccagtgtcggctgcggg
tgtgttttgaaggatttgattgagagcgcctgttttccgctggtacgtctgaataagatt
ttccgtcagagtgagggaagtgatgtcgtgacactggcacaccagattcgggagggctcg
gctgatattctggaccatgcaaaggatatcgcatttttcccctgtcagaattatgaggtt
cgtgatctgatactgagtgtggtatccaatgcactggacaagggctatgatccaaaggaa
atacaggtgctggcgccgatgtatggcggtgttgccggtattgatgctctgaacaatgcc
ctacagaaaatgatgaatccatccgattcatataaaaaagagctgaaggtaggctatcgt
ctgttccgtgagcatgacaagattctgcagctgaagaatcagccggaggatgaggtgtac
aacggagatatcggagaaatcatcgaaatcagctaccgcgatgacaacgtgcatcagaaa
aactgcatcacggcggattttgacggtgttcttgttgaatacagcggggaacagatttac
aatatcacgcatgcctatgcgacctccatccacaaggcacagggcagtgaatatgcaatt
gtcattatgccgatagtaaaggattatcgctatatgctgcagaagcgtttgatttacacc
ggtgttaccagagcaaagcgaagtctggtgctgctcggtgataaggaggtgttcctgcat
gcgctgcgcgtggaggaccgccatgtgcgtaggagtacactgcaggaaaaaataaaagaa
atgatgggataa
DBGET
integrated database retrieval system
