Clostridium innocuum: G4D55_11815
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Entry
G4D55_11815 CDS
T06525
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
ciu
Clostridium innocuum
Pathway
ciu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G4D55_11815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ciu03000
]
G4D55_11815
Transcription factors [BR:
ciu03000
]
Prokaryotic type
Helix-turn-helix
Other families
G4D55_11815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_1
TPR_2
TPR_7
HTH_3
DUF6340
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QIX09724
LinkDB
All DBs
Position
complement(2439439..2440623)
Genome browser
AA seq
394 aa
AA seq
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MDLRGFLVRCHRLQRNYSQEGLCRGICAVSYLSKLEQGKVQAADEIYQALFHRLGIVFQE
NEKWLAVWKEKLQELASAWFYGEQREAYELEKQMENLLNSPLCVDALLIKALYTKEHADK
PLASASVFLPYMQDAQRFLYHFLCAGQALQSREEQTLSAILAQLQEAQKYGGWSILYQMK
GDVYALMGDYSQALHHHLKAYDLACEEGFLPCMIDASMHIANCYSAMHAEGVMLMYYERC
EHLCRSSKNKQMQAHVWYNIGSTYQQWGDFQKALPLLLKAYQILDDTFLCCHKLALLYEQ
LNQKKEGLRYVQEMERQLDSHGADGRREIVQFVRYRYGTAVDAEAYIDCLYTLCDTSRYF
HGFCQFHLSYLIAALKKKRRYKEVMRLMEETKFS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggatttacgaggcttcctagtgcgctgtcatcggctgcagaggaattattcacaggag
ggtctgtgtcgtggcatttgtgcagtttcttatctcagtaagctggagcaggggaaggta
caggctgcggatgaaatttatcaggcactgtttcacaggctgggaatcgtgtttcaggaa
aatgaaaaatggcttgctgtttggaaggaaaagcttcaggagctggcgtcagcttggttt
tatggagaacaacgcgaagcgtatgagctggaaaagcagatggagaaccttttgaactct
cccctctgtgttgatgcgctgctcatcaaagcactgtatacgaaggagcatgcggataag
ccgctggcctctgcgtctgtttttcttccatatatgcaggatgcacagcggttcttgtat
cattttctatgtgcgggacaggcacttcaaagcagggaggaacaaactctttcagcgata
cttgcccagctgcaggaagcacagaaatatggagggtggagtattttatatcagatgaag
ggagatgtgtatgcgcttatgggggactattctcaggcgctgcatcaccatctgaaggcc
tatgaccttgcatgtgaggaaggctttctgccctgtatgatcgatgcgtccatgcatatt
gcaaactgctattccgctatgcatgcagaaggtgtcatgctgatgtattacgaacgctgt
gagcatctttgtcgcagcagcaaaaacaagcagatgcaggcccatgtgtggtataatatc
ggatccacatatcagcagtggggtgatttccaaaaggcgctgccactgcttttaaaggcc
tatcagatactggatgacacctttctatgctgtcataagctggcgcttttatatgaacag
ctgaatcagaaaaaggagggccttcgctatgtacaggagatggagaggcagctggattca
catggggcagacggtcgcagggaaatcgtgcagtttgtaagataccgctatggaactgcc
gtggatgcagaggcctatatcgactgcctgtatacgctctgtgacacttcccgttatttc
catggcttctgtcagtttcatctgtcctacctcattgctgcgttaaagaagaagcgcagg
tacaaggaggtcatgaggctgatggaggaaacgaaattttcctga
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