Clostridium innocuum: G4D55_12295
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Entry
G4D55_12295 CDS
T06525
Name
(GenBank) carbohydrate-binding protein
Organism
ciu
Clostridium innocuum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M60
F5_F8_type_C
fn3
MapZ_EC1
Endotoxin_C2
Motif
Other DBs
NCBI-ProteinID:
QIX09818
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Position
complement(2538547..2542215)
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AA seq
1222 aa
AA seq
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MKDTDSYHVFYKEETGDSFTKISNITKTNYTLEGLKDETTYILYVTGVNELGEGPGSMKV
KASTLSVKRAQMPSYKLINDSSGEGKLTQHIVSAKHVVGSMVNSSLDTDVQSANGLVDDS
YESYYRLEDWDDAVSYHQWQWGTTVQLDQEYTMDRFTLAAPMDTVGYGAAAIYYWDSEQN
KEVQASNVRIQQKDDGQGRKYYVIKLAKPIKTSRVRFGLTTSGGVRNIMVAEIRFFQYDS
LESDIQALFADDLHLTLAKDVDTELLNTLQQRLDTKNHGEYHPDQKALQVELDTAKQLYA
EQDTLNDTIAVHANLRSNKDSGISVGGLNAWQPLGISAYAGQELVIYVGNPGMKTGQNSS
LSLVATQQHAEASGFAKTIGNLKIGRNEITIPQITSTDVEKGGALYLQYNGNKDTDQYAV
RVSSGTRVPTLDLYQVKDKEERMKRIRTYIEELQGFVPNLQQQHEKDHKTEGNEQVSYAY
DEKTCVLNITDIMLDQMMYSIPASQVWNAVNDGSVEAGAEKLNASLNAMDDMMTLFYQHK
GLTDNFKEGTAQNVKDKNHLPAQHLNIRYMKMFDGAFMYASGNHIGVEWGSTRGLVNSKP
VEVDENGKKIGVGTYFGWGIAHEIGHNINQGSYAIAEITNNYFSLLAQADETNNGVRFKY
EDVYKKVTSNVTGRSDNVFTQLGMYWQLHLAYDRGYNYRTYADYDEIFKNLFFARVDSYA
RNTALAPAPNGIKLTLGKDAEQNIMRLASAAAEKDLSDFFQRWGMVMDADTKAYMQQFEK
EARAIYYVNDEARAYEIEHGASEGISGRDVATASVSKNDRSSVTLTLGNTADQAEAILGY
EIVRTTYDQGKQKDEVVGFTMDNKFTDQLGPVSNRSVSYKVTAIDKFLNRSAAVQVSPVK
VEGDGSQVKDSWTITTNMLSKDDEQKPAEGEDPCAPQLKSAAYRMIDDGTAEENTYTGAS
TNADPQITINMGKTTEVTALRYHRGTDERYDMTDYRIEISQDGKTFKKLKEGTFDFKDDV
ATVYFQNADNDPWIATYDAVYVRITALNKKNSTLVIPELDILGPTGDNIEFYNEEAAETA
SIGILKEDVILQEKDETHEEQKIEKGSLIFTGTYKGNPAYNVVMLYDEAGNIIGGTDAEG
SLIANQVIFAPNPQNALLGEVSEGTWVYWIAEKDLNVEQLPEKVRAELYRVDNALTNEGQ
RLVSDTLLVKIPEILPEITLTK
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatacagatagctatcatgtattctacaaagaagagaccggagattcctttaca
aaaatcagcaatatcacaaaaacaaattacacgctggaaggtttaaaggatgaaaccacg
tatattctgtacgtcacgggtgttaatgaactgggagaaggtcccggctccatgaaggtt
aaggcatcgacgttaagtgtaaagcgtgcgcagatgccttcctataagctgatcaatgat
tccagcggagaaggaaagctcacacagcatatcgtctctgcaaagcatgttgtcggaagc
atggtaaacagcagtctggatacagatgtccaaagtgccaacggtcttgtggatgacagc
tatgagtcctactatcgtttagaggactgggatgacgcggttagctatcaccagtggcag
tgggggactaccgtacagctggatcaggagtatacaatggatcgcttcacactggctgca
ccgatggatacggtcggctatggagctgcggcaatctactattgggacagtgaacagaat
aaggaagtacaggcatcgaatgttcgcatacaacagaaggatgacggacagggaagaaaa
tattatgtgatcaagctggcaaagccgattaagacaagccgcgtgcgttttggtctgact
acatccggcggtgtaagaaatatcatggtggcagaaatccgtttcttccaatacgattct
ctggaatcggatattcaggcattatttgctgatgatcttcatctgacactggcaaaggat
gtggacacagagcttctgaatacactgcagcagcgtcttgacaccaagaatcatggagaa
tatcatcctgatcaaaaagcactgcaggtggaactggatacagcgaagcagctgtatgcg
gaacaggatacgctgaacgatacgattgcagtacatgccaatcttcgctcaaacaaagat
tccggtatctctgtaggtggtctgaatgcatggcagccgctgggtatcagtgcttatgca
ggacaggagctggtcatttatgtaggaaatccggggatgaaaaccgggcagaacagttcc
ctgagtcttgttgcaacacagcagcatgcggaggcaagcggatttgccaagacgatcggc
aatttgaaaatcggcagaaatgaaataacgattccgcagattacttctaccgatgttgaa
aagggcggcgcgctttatcttcaatataacggtaacaaggacacggatcaatatgcggta
agagtcagctcaggcacaagggttccaacgcttgatctgtatcaggtaaaggataaagaa
gaacggatgaaaagaatccgtacctacatcgaagagctgcaaggctttgtcccgaatttg
cagcagcagcatgagaaagatcataaaacagagggcaatgagcaggtatcctacgcatac
gacgagaaaacgtgtgttttgaatatcacggatatcatgctggatcagatgatgtattcc
ataccggcatctcaggtttggaatgcggtgaatgacggctctgtagaggcaggcgctgaa
aagctgaatgcttcccttaacgcaatggatgacatgatgacgcttttctatcagcataag
ggactcactgataactttaaggaaggtactgcacaaaatgtgaaggacaagaatcattta
cctgcacagcatttgaatattcgatacatgaaaatgtttgacggcgcctttatgtatgct
tccggcaatcatatcggtgtggaatggggttccacacgcggactggtgaacagcaagccg
gtagaggttgatgaaaacggaaagaaaatcggggttggaacatacttcggctggggcatt
gctcatgaaatcggacataacatcaatcagggaagctatgcaattgctgaaatcacaaac
aattatttctcccttctggcacaggcagatgagacgaataacggtgtgcggttcaaatat
gaggatgtatacaaaaaagtaacatccaatgtaacggggcggagtgacaatgtattcaca
cagcttggaatgtactggcagctgcatctggcatatgatcgcggatataattacaggacc
tatgcggattatgatgaaatattcaaaaatctgttctttgcgcgcgtagacagctatgca
agaaatacagcattggcacctgctcccaatggtatcaagctgacacttggcaaggatgcc
gaacagaatatcatgcgtctggcgagtgctgcggcagaaaaggatttgagtgacttcttc
cagcgctggggtatggtgatggatgcggataccaaagcatatatgcagcagtttgaaaag
gaagcacgcgccatctattatgtaaatgatgaagcacgtgcctatgaaatcgagcatggc
gcaagtgaaggtatcagcggcagggatgttgccactgcatctgtttcaaagaatgatcgc
tccagcgtaacactgacactgggcaatactgcggatcaggcagaagcgattcttggttat
gaaattgtaagaacgacctatgatcagggaaagcaaaaggacgaggttgtcggatttacc
atggacaacaaattcacagatcagctgggtccagtaagcaaccgctctgtttcctataag
gtgactgcgattgataaattcctgaaccgctcagcggccgtacaggtttctccagtcaag
gtagagggtgacggcagtcaggttaaggacagctggaccatcacgacgaatatgctgtca
aaagatgatgaacagaagccggcagaaggcgaggatccatgtgctccacagctgaaatca
gcggcataccgcatgattgatgacggtacggcagaagaaaacacctataccggtgcatct
acaaatgcggatccgcagattacgatcaatatgggaaaaaccacggaagtgacagccctg
cgttatcaccgcggtacggatgaacgttacgatatgacagattacagaattgaaatcagt
caggatggcaaaacatttaaaaagcttaaagaaggaaccttcgactttaaggatgatgtg
gcaactgtctatttccaaaatgcggacaacgacccatggatagcaacctatgatgctgtt
tatgtacgtatcactgctttaaacaagaaaaacagcacactggtcattccggaattggat
attctgggaccaacgggtgataatatcgaattttataatgaggaagcggcagagacagcg
tcgatcggtattctgaaagaagatgttatccttcaggagaaagatgaaacgcatgaggaa
cagaagattgaaaagggatctctgatttttacaggaacctataagggaaacccggcttat
aatgtcgttatgctgtatgatgaagcaggaaatattatcggcggaacagacgcagagggt
tctctgattgccaatcaggttatttttgccccaaatccacagaatgcattgcttggtgag
gtttccgagggtacctgggtatactggattgcagaaaaagacttgaacgttgagcagctg
cctgaaaaagtccgtgcagagctgtatcgtgtggacaatgccctgaccaatgagggacag
cggctggtcagcgataccctgctcgtcaagattccggagattttgccggaaatcacattg
acaaaataa
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