Clostridium innocuum: G4D55_12440
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Entry
G4D55_12440 CDS
T06525
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ciu
Clostridium innocuum
Pathway
ciu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
G4D55_12440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ciu02000
]
G4D55_12440
Transporters [BR:
ciu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
G4D55_12440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
NTPase_1
AAA
ABC_membrane_3
SMC_N
AAA_24
Rad17
AAA_5
AAA_23
AAA_14
DUF87
DEAD
nSTAND3
AAA_18
AAA_30
IstB_IS21
AAA_16
AAA_7
TsaE
AAA_15
AAA_29
ATP_bind_1
DO-GTPase2
AAA_28
Zeta_toxin
AAA_33
RsgA_GTPase
Pex14_N
ABC_membrane_2
Motif
Other DBs
NCBI-ProteinID:
QIX09841
LinkDB
All DBs
Position
complement(2569453..2571318)
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AA seq
621 aa
AA seq
DB search
MSKENRSSHAAKRGPMGHRGPGAPTEKAKNFKGTMKQLIAYMRPYYLNIIVSMLFAVLSV
VFMVVGPKILGRATTELVSGFTAKIYGTGSINFDRIAEILLFLIAIYLISTLCNFIQNWM
MAGVAQKVSFNLRKTMAAKIDILPFSYFDKQSHGEVLSRFSNDIDTVQQTLSQSLAQMIT
SIVQIIGFLVMMLSISWQMTLMALVVIPLSLFLVTTVVKHSQKYFAKQQRSLGNVNGHIE
EMYSGHIVMKAFNGEEKSIAQFAEYNDELYDSAWKSQFLSGLMQPIAMFVGNIGYVGVCI
LGGWLAMNGVIEIGDIQSFIIYVRNFNNPISQVAQTMNVLQSTAAAAERVFEFLSEEEEV
KETTQPVEVFDANGKTSIKGQVTFENVHFGYTPDKIVINDFSMYIKPGKKIAIVGPTGAG
KTTIVKLLMRFYELNSGSIYIDGIKTTDMRRSDLRSLFGMVLQDAWLFNGTVMENLRYGR
LNATDEEVMAAADAAYVDHFIRTLDHGYDTMINEESNNISQGQKQLLTIARAFLADPKVL
ILDEATSSVDTRTEVLIQKGMEKLMENRTSFVIAHRLSTIRDADLILVMKDGDIVEAGNH
EDLMKADGFYTKLYNSQFEEV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaaaccgttcttcacatgcagcgaagcgaggaccgatggggcacagaggc
ccgggcgctcctacagaaaaagctaaaaatttcaagggcaccatgaagcagctgattgct
tacatgcgcccctattatctgaatattatcgtatccatgctctttgccgtactgtctgtg
gtctttatggtcgttggaccaaagattctgggaagggcgacaaccgagctggtcagcgga
ttcaccgctaaaatatatgggacaggatccatcaatttcgaccgtatcgcagaaattctg
ttatttctgattgctatctatctgatttccaccctatgcaatttcattcagaactggatg
atggcaggtgtggcacagaaggtatccttcaatctgcgcaagacgatggcggcgaaaatc
gacattctgccattctcctattttgataagcagtctcatggtgaggtgctgtcacgcttt
tccaatgatattgatacggtacagcagaccctgagccagtctctggcacagatgataacc
tctattgtgcagattatcggattccttgtcatgatgctgtccatcagctggcagatgact
ctgatggcactggttgtcattccgctgtccctgttcctggttacgaccgttgtcaagcat
tcccagaaatactttgcaaagcagcagcgttccttgggaaatgtgaatggacacattgag
gagatgtacagcggtcatattgttatgaaggccttcaacggtgaggaaaagagtattgct
cagtttgccgaatacaatgatgagctttatgattccgcatggaaatcacaatttcttagt
ggattgatgcagccgattgccatgtttgtcggaaatatcggctatgtcggagtatgtatt
ctgggaggctggctggcgatgaacggggtcattgagattggtgatatccagtccttcatc
atctatgtccgaaacttcaacaacccgatatctcaggttgcgcagacgatgaatgtcctg
cagtccacagccgcagctgcagaacgtgtgtttgaatttctgtcagaagaggaagaggtc
aaagaaacgacacagcctgtcgaggtctttgatgcaaacggaaaaacgagcatcaaggga
caggttacctttgaaaacgtacacttcggctatacaccggacaaaatcgtcatcaatgat
ttctccatgtatatcaagcccggaaagaaaatcgccatcgtcggaccaaccggtgccgga
aagacgacgattgttaagctgctcatgagattttatgagctgaacagcggcagcatctat
attgacggtattaagacgacggatatgcgcagaagcgatttacgctcactgttcggtatg
gtgctgcaggatgcgtggctgttcaacggaactgtcatggagaatctgcgctatggccgc
ctgaatgctaccgatgaggaagtcatggctgcggcagatgctgcctatgtcgatcatttc
attcgtacgctggatcatggctatgatacgatgattaatgaggaatccaataatatctcg
cagggacagaaacagctgctgaccattgcgcgtgccttccttgcagatcccaaggtgctc
attctggatgaggcaacctcctctgtcgatacccgtacggaggtactgattcaaaagggc
atggagaagctgatggagaaccgtacaagctttgtaattgcacaccgtttgtctacgatt
cgggatgcggatctgattcttgttatgaaggatggcgatattgtggaagccggaaatcat
gaggatctgatgaaagcggatggcttctataccaagctgtacaactcccagtttgaggaa
gtataa
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