Clostridium innocuum: G4D55_12855
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Entry
G4D55_12855 CDS
T06525
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ciu
Clostridium innocuum
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ciu03009
]
G4D55_12855 (rimO)
Enzymes [BR:
ciu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G4D55_12855 (rimO)
Ribosome biogenesis [BR:
ciu03009
]
Prokaryotic type
ribosomal protein modification factors
G4D55_12855 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
GT-D-like
Motif
Other DBs
NCBI-ProteinID:
QIX09917
LinkDB
All DBs
Position
complement(2658512..2659813)
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AA seq
433 aa
AA seq
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MKIGFISLGCSKNLVDSEKMMGMINSGGHELVHNADEAEAIIINTCGFINSAKEEAIQTI
FQMAEYKKHRCRKLIVVGCLAQRYKEQLEQDIPEIDAVISIREYPHLHELLPKLLDGHDL
VSYDKCERKVSSKPWTAYLKIAEGCSNHCTYCAIPLIRGDNVSFPIEQLVEEAKQLAQRG
VRELVVIAQDTTKYGVDLYGRRALLDLLQQLHEIEGFHWIRILYMYPDEIDARLIEGMAK
LPKVLPYFDIPMQHASNRMLQLMNRRGSREDVATLVKKIRETFSYPTLRTTFIVGFPTEE
EADFSELMQFVEDIHWDRMGAFPYSPEEDTPAYSMDGAVDEDVKEARLAQLMKRQEEISL
ENQRRMVGEIIEVLVEDQEGLTGVYRGRGASSAPDEVDGIVMFKSERFIEFGSFVKVRIT
EALPHDFKGVEVC
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgggtttatatcactgggctgcagtaaaaatctggtagacagtgaaaaaatg
atgggtatgatcaatagcggcggccatgagctcgttcacaatgcggatgaggcagaggca
atcattatcaatacgtgcggatttatcaattccgcaaaggaagaggccattcagacgatt
tttcagatggcggagtataaaaagcacaggtgcagaaagctgattgttgtcggctgtctg
gcacagcgttataaggaacagctggagcaggatatcccggaaattgatgcagtgatcagt
attcgcgaatatccgcacctgcatgaactcttaccaaagctgctggacgggcatgatctg
gtaagctatgacaaatgtgagcggaaggtgtccagcaagccgtggacggcatatctgaaa
attgccgagggctgcagcaatcactgtacctattgtgcgattccgctgattcgcggggat
aatgtgtcctttcccatcgagcagctggtggaagaggcgaaacagctggcgcagcgcggt
gtcagggagctggtggtgattgcacaggatacgacaaaatacggcgtcgatctgtatggc
agaagagcactgcttgatctcttgcagcagctgcatgaaatcgaaggcttccactggatc
cgtattctgtatatgtatccggatgaaatcgatgcccggctgattgagggaatggcaaag
ctgccaaaggtgctgccatattttgatattccaatgcagcacgcttccaatcgcatgctg
cagctgatgaatcgaagaggaagcagagaagatgttgccactctggtgaagaagattcgg
gaaaccttttcctacccaaccctgcgtacaacctttattgtcggattcccgacagaggag
gaagcagatttcagcgagcttatgcagtttgtagaggatatccactgggaccgtatggga
gcctttccctattccccggaggaggacacccctgcctattctatggatggggccgtggac
gaggatgtaaaggaagcgcgtctggcgcagctgatgaagcgtcaggaggaaatatcactg
gagaatcagagacgtatggtaggtgagatcattgaggttcttgttgaggatcaggaaggt
cttaccggcgtgtatcgcggacgcggggccagctctgcaccggatgaggtggacggcatt
gtgatgtttaaaagtgagcgctttatcgaattcggcagctttgttaaggtgcggatcact
gaggcactgccccatgacttcaagggtgtggaagtgtgctga
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