Clostridium innocuum: G4D55_13225
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Entry
G4D55_13225 CDS
T06525
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ciu
Clostridium innocuum
Pathway
ciu00550
Peptidoglycan biosynthesis
ciu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G4D55_13225
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
G4D55_13225
Peptidoglycan biosynthesis and degradation proteins [BR:
ciu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
G4D55_13225
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Peptidase_U4
Motif
Other DBs
NCBI-ProteinID:
QIX09982
LinkDB
All DBs
Position
complement(2736602..2738521)
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AA seq
639 aa
AA seq
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MIRGKVKTRISTIFLCCILIFCCILGKLGYEQIFHHTDIMEKALSLWERDFTVAGLRGSI
LDKNGNVLAHDIPSTSVMVVPAQIQDADKTAQQLADVLQADKKKILSTITKHVSTQKLQP
EGRLISDDKARKLEAMDLPGVYLVQDSLRNYPNNNYLAQVLGFTGIDNQGLAGLELQYND
ILSAKSGALNIPFDAKGHNVELYKESYEAPGRGMDVQLTIDSNIQDIVERELNNLVKRYK
PKSALALAMNPNTGEILAMVSKPDFDPNHYKDYSSDVYNRNLPIWKSYEPGSTFKSVTFA
SALELKLFDMFKDTYYDRGYEMVGGARIKSWKAGGHGQQTFLQVLENSSNPGFVEISRRM
GLDNEYDFVKKFGFGEKTGIDLPGESKGIMFKKSAMGELEQATVAFGQGLSVTPIQLVTA
FSAIINGGTLYTPYITKSINDPITHDAILEYKPTAKRKVISEDTSKKMRYALESVVANGG
GKPAYTEGYKIGGKTGTAQIAENGVYSTSNYILSFLSAAPIDDPQIVLYIAADSPQNDVL
YGGTVIAPVAKACYEDILPYLGVKKAEEQIPKKLVWPETENIKVQDFRGKKKKDVAQEGV
TFTFIGSGDTVMEQMPEAGTTLSAEGGEVWIYLGNDKVK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgattcgaggaaaggtcaaaacgagaatatccactatctttctctgctgcattcttatt
ttttgctgtatactgggcaagctcggttatgaacagatctttcatcataccgatattatg
gaaaaagccctgagcctgtgggagcgtgactttaccgtagcgggtctgcgcggctccatt
ctggataaaaacggaaatgttctggcacatgatattccaagtacatcggtgatggtcgta
cctgcccagatacaggatgccgacaagacagcccagcagctggcagatgtattacaggcg
gataagaaaaaaatcctgtctaccatcaccaagcatgtcagcacccagaagctgcagccg
gagggacgtttgatcagcgatgataaggcgcgcaagctggaggcgatggatttaccaggc
gtttatctggtgcaggattccctgcgcaactatccgaataataactatcttgcacaggtg
ctgggctttaccggtatcgataatcaggggttggcaggtctggagctgcagtataatgat
attttgtctgcgaaaagcggtgctttgaatatcccgtttgatgccaaggggcataatgtt
gaattatataaggaaagctatgaggcaccgggcagagggatggatgtacagctgaccatt
gattccaatattcaggatatcgtggagcgggagctgaacaatctggtcaagcgctataag
ccgaaatccgcactggctctggcgatgaatccgaataccggggaaattctggccatggtc
agtaagcctgacttcgatccgaatcattacaaggattattccagtgatgtatataaccgc
aatctgccaatctggaagagctatgagcccggctccacctttaaatccgtaaccttcgct
tctgcattggagctgaagctgtttgatatgtttaaggatacgtattacgaccgcggctat
gaaatggtcggcggtgcccgtatcaaatcctggaaggcgggaggtcatgggcagcagacc
ttcctgcaggtgctggaaaattcctccaatcccggctttgtggaaatatcgaggcgtatg
ggactggacaatgaatatgactttgtaaaaaaattcggcttcggtgaaaaaacgggcatt
gatctgcccggagaaagcaagggcatcatgtttaagaaaagtgcgatgggagagctggaa
caggcgacggttgcatttggacaggggctgagtgtcacaccgattcagctggttaccgct
ttctctgccatcatcaacggcggaaccctgtatacgccgtatatcaccaaaagcatcaac
gacccgattacccatgatgcaatactggaatataagccgacagcaaaacgcaaggtgatc
agtgaggataccagcaagaagatgcgctatgcattggaaagtgttgtcgccaacggcggc
ggtaagccggcatataccgagggctataaaatcggtggtaagaccggtacggcacagatt
gcggaaaacggtgtgtattccaccagtaactacattctgtcctttctgagtgcggcaccg
attgatgatccgcagatcgtgctgtatattgcggcagacagtccgcagaatgacgtactg
tacggtggaacggtcattgcgccggtcgcaaaggcctgctatgaggatattctgccctat
ctcggtgtgaaaaaggcggaggaacagattccgaagaaactggtctggccggaaacggaa
aatatcaaggtgcaggattttagaggaaagaagaaaaaggatgtagcgcaggagggtgtc
acctttacctttatcggcagcggcgatacggtaatggaacagatgccggaagcaggcacc
acactcagtgctgagggaggggaggtttggatttatcttggaaatgataaggttaaatga
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