Clostridium innocuum: G4D55_15700
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Entry
G4D55_15700 CDS
T06525
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ciu
Clostridium innocuum
Pathway
ciu03420
Nucleotide excision repair
ciu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G4D55_15700
03430 Mismatch repair
G4D55_15700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ciu03400
]
G4D55_15700
Enzymes [BR:
ciu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4D55_15700
DNA repair and recombination proteins [BR:
ciu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G4D55_15700
MMR (mismatch excision repair)
Other MMR factors
G4D55_15700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
PcrA_UvrD_tudor
ResIII
DEAD
DUF1543
Motif
Other DBs
NCBI-ProteinID:
QIX10428
LinkDB
All DBs
Position
complement(3246849..3249140)
Genome browser
AA seq
763 aa
AA seq
DB search
MSFLDQLNEHQLEAVQCVDHHLRIIAGAGSGKTRVVTTRIAYLINDCGVYPNKVLAITFT
NKAAREMKERVENLLGDVAKAVTISTIHSFCVRLLREDILELGYPRNFTILDADDQKSIL
RDAYKQMHIDVKSYSYNSVLSYISNNKTNFIDAATAKAGAGKWAGEQIKADVYEFYEKRL
KEMYALDFDDLLIFAHRILKSKEEVRAKWQRRFTYLHVDEFQDVDNLQYAIIKLLVKEGS
YLCVVGDPDQTIYTWRGAQVDIIMNFERDFPDSHTVVLNENYRSTQQILNGANALIKNNR
NRIDKDLFTRVESEDKIIHFSAMDDANEPVWVASKIMTLHHSHVDYRDIAILYRSNFLSR
GLEKVLLDFHIPYRIYGGVRFYDRAEIKDALSYLRLLAPFDEQDPKALYKNLAVKRVINS
PKRGIGAKTLETIELQANHDETNMYDVLCEYEIGKGKARANIQAFVAMIEECRMLVDTIS
IDQLLEKVLEDSGYLDMLREDKEIERLENIKELIGDISDYVEAHPEGTLNEYLQEISLYS
DKEEQENGDFVQLMTIHAAKGLEFDNVFVYSLCEGIFPNERSVGEGGQPALEEERRLAYV
AFTRAKKQLFLSDSYGYSYVLDKIKTTSRFIKELPEDCIEDVGAKPRNTFSSDVDTFSGS
DFLSMHSSDMVQHRPQESSGYARQAERKLSDVRIADSFDGAPIINEDRKPKKKGKIRKGD
LVHHESFGDGVVIKLEEQLATIAFEQKFGIRKIKIDHPALSKK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtttttagatcaattgaatgagcatcagttagaggcagtacagtgtgtggatcat
cacctgcggatcattgcgggggcaggaagtggaaagacccgggtggtaacgaccagaatt
gcatatctgatcaatgactgcggagtatatccgaataaagtattagccatcacctttacg
aataaggcggctagagaaatgaaagagcgagtggaaaatctgctgggagatgtagccaag
gcggttacgatttccaccattcactccttttgtgtgcgtctgttgcgggaggacattctg
gagctgggatatccgaggaatttcacgattctggatgcggatgatcaaaagagcattttg
cgggatgcctacaagcagatgcatatcgatgtcaaaagctacagctacaacagtgtgctg
tcgtacataagcaacaacaaaacgaattttattgatgccgcaacagccaaggcgggtgcc
ggcaaatgggcgggtgaacagatcaaggccgatgtctacgagttttacgagaagcgcctg
aaggaaatgtatgcgctggatttcgatgatctgctgatttttgcccaccgtatattgaaa
agcaaggaagaggtacgcgcaaaatggcagcgccgcttcacgtatctgcatgtcgatgag
tttcaggatgtcgataatctgcagtatgccatcatcaagctgctggtaaaggaaggcagc
tatctgtgcgtggtcggcgatcccgatcagacgatttatacctggcgtggtgcacaggtg
gatatcattatgaattttgaaagggattttccggacagccataccgttgtgctgaatgag
aactaccgttccacccagcagattctgaacggtgcgaatgcactgatcaagaataaccgc
aaccgtatcgataaggatttgttcacccgtgtggagagtgaggataaaatcattcatttc
tctgctatggatgatgcaaacgaaccggtctgggttgccagcaaaatcatgacgctgcat
cacagtcatgtggactatcgggatattgcgattttgtatcgctccaactttctgtcaaga
ggtctggaaaaagtgctgctggatttccatattccgtatcgcatctatggaggtgtgcgc
ttctatgaccgtgcggagatcaaggatgccttaagctatctgcgtctgttggctcccttt
gatgaacaggatcccaaggcgctgtacaaaaatcttgccgtcaagcgcgtcatcaattct
ccgaagcgaggaatcggtgcaaagacgctggaaaccatcgagctgcaggcaaaccatgat
gaaacgaatatgtatgatgtcctgtgcgaatatgaaatcggaaagggcaaggcaagagcc
aacatacaggcgtttgttgcgatgattgaggaatgccgcatgctggtggatactatcagc
atcgatcagctgctggagaaggtgctggaggacagcggttatctggatatgctgcgggaa
gacaaggaaatcgagcgtctggaaaatatcaaggaactgatcggggatatctcggattat
gtggaagcacatccggagggtaccctgaatgaatacctgcaggaaatctccctgtattcc
gataaggaggaacaggagaacggggactttgtacagctgatgacgattcatgccgcaaag
ggtctggaatttgataatgtctttgtgtacagcctgtgcgagggaatcttcccgaatgaa
cgctctgtgggagaaggcggacaaccggcgctggaggaagaacgccgtcttgcctatgtt
gcctttacacgggctaaaaaacagctgtttttatccgactcctacggctacagctatgta
ctggataaaatcaaaacaacctcccggttcatcaaggagcttcccgaggactgtatcgag
gatgtcggcgcaaaaccgcggaatacattttccagcgatgtcgataccttcagcggcagt
gactttctgtccatgcacagcagtgacatggtacagcatcgtcctcaggaaagcagcggc
tatgcaagacaggccgagcgaaaattaagcgatgtacgcattgcagattcatttgacgga
gcaccaatcataaatgaggataggaaacctaagaaaaagggtaaaataagaaaaggcgat
ctggttcatcacgaaagcttcggagacggcgttgtcatcaagctggaggaacagctggca
acgatagccttcgaacagaaattcggaatccgaaagatcaagatcgaccatccggcttta
tcgaaaaaatag
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integrated database retrieval system
