KEGG   Clostridium innocuum: G4D55_16995
Entry
G4D55_16995       CDS       T06525                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K01356  repressor LexA [EC:3.4.21.88]
Organism
ciu  Clostridium innocuum
Brite
KEGG Orthology (KO) [BR:ciu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ciu01002]
    G4D55_16995
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ciu03400]
    G4D55_16995
Enzymes [BR:ciu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.21  Serine endopeptidases
    3.4.21.88  repressor LexA
     G4D55_16995
Peptidases and inhibitors [BR:ciu01002]
 Serine peptidases
  Family S24: LexA family
   G4D55_16995
DNA repair and recombination proteins [BR:ciu03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    G4D55_16995
SSDB
Motif
Pfam: Peptidase_S24 HTH_31 Xre-like-HTH HTH_26 LacI HTH_3 HTH_23 HTH_Tnp_1_2 HTH_Crp_2 Phage_CII HTH_36 HTH_28 DUF4107 HTH_Tnp_ISL3 HTH_Tnp_4
Other DBs
NCBI-ProteinID: QIX10656
LinkDB
Position
3496919..3497515
AA seq 198 aa
MQLKDLLNEYKCRMSVTNDYIAEHVGVNKSTVSRWMKGETKVMKPAVIEKLSYLLGTDVE
SLLKNSDRFEKPLLGSAKAGYGLFAEENLAGYEEVSKSDYYRGDYFLRVCGDSMTGAHIH
DQDLIYVKQCDDVKSGTIAVILIGNTEVTVKRIIKKEPFLILEAANPTVPARYFTQEEVR
DLPVKIIGKVLYSRSDIA
NT seq 597 nt   +upstreamnt  +downstreamnt
atgcagctaaaagatttattaaatgaatataaatgccggatgagtgttaccaatgactat
atagcagagcatgtcggcgtcaataaatcaacggtttcacggtggatgaagggtgagact
aaggtcatgaagcctgctgttattgaaaagctttcttatctgctggggacagatgtagaa
tccttattaaagaattctgacagatttgaaaagccgctgcttggatcagcaaaggccgga
tatggattatttgcagaagaaaacttggcaggctatgaggaggtatcaaagagcgattat
tatcggggcgattattttcttcgcgtctgcggtgactccatgacaggtgctcatatacat
gatcaggatcttatctatgtaaagcagtgtgatgatgtaaaaagtggtactatcgctgtt
atcctgattggaaatacagaggtgaccgtaaaacgcattataaaaaaagaacctttcctc
attctggaggcagccaatcccacagtgcctgcccgctactttacgcaggaggaagtgaga
gatctccctgtaaaaattattggaaaagttctttacagccgctctgatatcgcctga

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