Clostridium innocuum: G4D55_18290
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Entry
G4D55_18290 CDS
T06525
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
ciu
Clostridium innocuum
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciu03019
]
G4D55_18290 (rapZ)
Messenger RNA biogenesis [BR:
ciu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G4D55_18290 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
nSTAND3
AAA_28
AAA_30
bpMoxR
AAA_29
PGM_PMM_II
AAA_22
ABC_tran
AAA_23
AAA_16
Rad17
SRP54
Motif
Other DBs
NCBI-ProteinID:
QIX10893
LinkDB
All DBs
Position
complement(3747610..3748464)
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AA seq
284 aa
AA seq
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MNEQNVVLITGMSGAGKTTAMGILEDMGYHCIDNFPVQLLESLGKIINAKPDPRYSNIAL
ATTAIDYPKFLQYFENIDVNVRVVFLDASNEKLLLRYKFTRRHHPMMMFSKANTLEEAIE
VERDMFNALNERAVLHIDTTMMDQHGLKSVLMEKLSLNSKPVFSISFVSFGFKHGVPMDV
DLVFDVRFLPNPYYIEELREQTGDDAPVYDYVMSFDQTKEFIRHLKSFLDYVFIQYKNEK
KNHLTVGIGCTGGHHRSVSVTNWLYSHYRDHYHCYKSHRDKKVG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacagaacgtagtattgataacaggaatgtccggagccggtaaaacgacggcc
atgggtattctggaggatatgggatatcactgcattgataatttccccgtgcagctgctg
gaatctctgggaaaaattatcaacgccaagccggatccgcgctacagcaatatcgctctg
gcaacgactgcgatcgattatccgaagttcctgcagtattttgagaatatagatgtaaat
gtacgcgtggtttttctggacgcatccaatgaaaagctgctgctgcgctataaattcaca
agacgccatcacccgatgatgatgttttccaaggcgaatacgctggaggaggctatcgag
gtggaacgtgatatgttcaacgcgctgaatgaacgtgcggtccttcacatcgacacgacc
atgatggatcagcacggcttgaaaagtgtgctgatggagaagctctcactcaacagcaag
ccggtcttctcgatttccttcgtatcctttggctttaagcatggcgtaccgatggatgta
gaccttgtttttgatgtcagatttcttccgaatccatattatatagaggagctgcgtgaa
cagactggcgatgatgctccggtctatgattatgtcatgagctttgatcagacgaaggaa
tttatccgtcatctgaaaagctttctggactatgtgtttatccagtataaaaatgaaaag
aaaaatcatttaaccgtgggaatcggctgtaccggagggcaccaccgaagcgtgtctgtc
accaactggctgtattcccactatagggaccattatcattgctataaatcacacagagat
aagaaagtaggctga
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