Clostridium innocuum: G4D55_19130
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Entry
G4D55_19130 CDS
T06525
Name
(GenBank) M20 family metallopeptidase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ciu
Clostridium innocuum
Pathway
ciu00300
Lysine biosynthesis
ciu01100
Metabolic pathways
ciu01120
Microbial metabolism in diverse environments
ciu01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ciu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G4D55_19130
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ciu01002
]
G4D55_19130
Enzymes [BR:
ciu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
G4D55_19130
Peptidases and inhibitors [BR:
ciu01002
]
Metallo peptidases
Family M20
G4D55_19130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
Peptidase_M28
PDE8A_N
CggR_N
Motif
Other DBs
NCBI-ProteinID:
QIX11048
LinkDB
All DBs
Position
complement(3950950..3952311)
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AA seq
453 aa
AA seq
DB search
MKTIYDTGKRTSELLQDLKQLVEIPSVRDERTAGSSAPFGKEIRNAMDVFLQIAQREGFS
VHDFDGYAVDAQLGEGDDYIGVLAHLDVVEAGERSHWHGDPFQMQEIDGMLYGRGVNDDK
GPLLAALYAMARIRQEGRTLYHPIRLIAGGAEETTWECMEHYFKHNPQPIFGFSPDGNFP
IVNGEKGILQVRFLLNADSDISLHCKERLHIVCDDLQVIVPKGSDVSFVERTNLIEVMQD
GIKITYRGVRALSRNPQRGDNAIFKFVKDFHGHLDQAGSLYPMVNMIYENFLDDFYGKKS
GLYHEDAAMGCGSVCLMSLNTQDGQLELCVDVRYVRSTDEQSLLHTLRKTAQHYGCELEV
LRHKRLLYVAEDSTLIQSLKTAYHRVMKEDAAVFTKGGASYARVLEHGVAFGATFPDEDP
RPHMPNECMPVKSLLKASDIYYEALVELACTKR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactatctatgatacaggaaaaagaacgagtgagctgctgcaggatttaaagcag
ctggtggaaattccttccgtccgtgatgagcgcactgcaggttcatctgccccgtttggc
aaagagatacggaatgcaatggatgttttcctgcagattgctcagcgggagggctttagc
gtccatgattttgacggctatgctgtagatgcccaacttggtgagggagatgattatatc
ggcgtgctggctcatctggatgtggtggaagcaggagaacgctctcactggcacggcgat
ccctttcaaatgcaggagatagacggtatgctgtacggccggggagtcaatgatgacaag
ggaccgctgctggcagctttatatgcaatggcccgtatcaggcaggaaggtcgtacactg
tatcatccgatccgcctcattgccggaggggctgaggaaacaacatgggaatgcatggag
cattatttcaagcataacccgcaaccaatcttcggcttttccccggatggcaactttcct
attgtcaatggagaaaaggggattttgcaggtacgcttcctgctgaatgcagattcggat
atcagcctgcactgcaaggagcgtctgcatatcgtctgtgatgatttacaggtgattgtt
cccaagggcagtgatgtcagctttgttgagcgtaccaatctgattgaggttatgcaagat
ggcataaaaatcacctatcgtggtgtacgtgcactttcccgcaatccgcagcgcggggat
aatgctattttcaaatttgttaaggattttcacggacacctcgatcaagcaggctctctg
tatccgatggtgaatatgatatacgagaattttcttgatgatttttacggtaagaaaagc
ggtttgtatcatgaggatgctgccatgggctgcggctctgtttgtttgatgtcgctgaat
acgcaggatggacagctggagctgtgtgtcgatgtgcgttatgtgcggtcaacggatgag
caaagccttcttcatactttacgcaaaacggcacagcattatggctgtgagcttgaggtt
ttacgccataagcgtctgctctacgtcgcagaggacagcactttgattcagagtctgaaa
acagcatatcacagggttatgaaggaagatgctgcggtgtttaccaaggggggagcctcc
tatgcccgcgttctggagcacggggtggcatttggtgcgacctttcctgatgaggatccc
cgccctcatatgcccaacgaatgtatgcctgtgaagtcgctgttaaaagcgagtgacatc
tactatgaggcacttgtggaactggcatgtacaaaaaggtga
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