KEGG   Clostridium innocuum: G4D55_19220
Entry
G4D55_19220       CDS       T06525                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ciu  Clostridium innocuum
Brite
KEGG Orthology (KO) [BR:ciu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ciu02048]
    G4D55_19220
Enzymes [BR:ciu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     G4D55_19220
Prokaryotic defense system [BR:ciu02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    G4D55_19220
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Cas3_HD Helicase_C PhoH AAA_22 HD Helicase_RecD AAA_19 UBA_BRSK DUF2067 ATPase
Other DBs
NCBI-ProteinID: QIX11064
LinkDB
Position
3971296..3973662
AA seq 788 aa
MNILAHINSNQEMQSLQEHSEHTFTAIKEYAAARGLTNCMKLTAFLHDCGKASREFQKYI
TKAAMENIFLPKVNHSSAGAQILLEVCRSYSDMSECLVKLMLANAIVSHHGLCDFINVHG
DNALRSRCYPKKALDMEHITAFMNDFISTEELENLFRAAHKELSVYLANFMKQKTAQDAK
DYYFYIGALQRLLMSLLIHGDREDTRNFMEHTQTIVYTEDTIWQAATDKLESHLAEITAN
SSFNPINELRASISDQCKAFSSHSPGIYRLSCPTGSGKTLASLRYALHHAKKYHKKHIIY
VAPFKTILEQNAEVMKQFFNEDLVLEHHSNIIPSQYTDYDYYSSSWNKPVILTTAVRLFD
VMFKDRTTDVRRFHQLADSVLIIDEAQKIPVQTISMFNEMMNFLAYNCNTTVVLCTATQP
LLETTTYPIKLASESEIVKQTKEMQEQFKRVHIEDACRRGGYSIADLSDFIFQKLQPGCS
MLVIVNTKAEALNLYRACEQHHEIDGLHLYHLSTSMCPEHRHLTLEDLKEHMEQKDTVLC
IATNLIEAGVDIDCDVVIRSLCGLDSILQAAGRCNRNGKNSELGTVYLINSNEEHIEKLK
DVRKGQNETDILLSQLHASKEGNRVDELLTLPFIRQYYDSYLFDRRQDTEYSTKIENRKV
SLFDLFSRIGSKKESDDLAHPCLGHALKSAGEKFEMIDSQSIGVLVPYKDGEKLINQLNS
SISNAEKYALLDKTQRFMVNVYEHKYKELEKEDMIYQLEFNGMLVLRDGFYKKDTGLEVR
KELEDMFV
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgaacatattggcacatataaatagcaatcaggaaatgcagtcattacaggagcacagc
gaacatacctttacagcgattaaagaatatgcagctgcaagaggtctgacaaattgcatg
aagctgactgcttttttgcatgattgcggcaaggcttccagggaatttcagaagtacata
acaaaagcagcaatggaaaatatatttcttcccaaggttaatcattcatcagccggcgcg
cagattctgcttgaggtgtgcagatcttacagtgatatgagtgagtgtctggtaaaactc
atgttagcaaatgcaattgtttctcatcatgggttatgtgatttcataaatgtgcatggt
gataatgccttgcgcagccggtgttatccgaaaaaagcattggatatggaacacattacc
gcctttatgaatgactttatttccacagaggaattggaaaatcttttccgtgcagcgcat
aaggaactttcggtctatcttgcaaatttcatgaagcaaaaaacggctcaagatgcgaag
gactattatttttatattggagctttacaacgacttctcatgtctttactaattcatgga
gatcgtgaagatactcgcaatttcatggaacacacacaaacaatcgtttatacagaagat
actatatggcaagcagcaacagataagcttgagagtcatttagctgagataactgcaaat
tcctctttcaatccaatcaatgaattgcgcgccagtatctctgatcagtgtaaagcattt
agcagccattctcctggtatttatcgtctgtcctgtccaactggctcaggtaaaacactc
gcatcacttcgttatgctctgcatcatgcgaaaaaataccataagaagcatatcatttat
gttgcaccctttaagaccatattagaacaaaatgcggaagtgatgaagcaatttttcaat
gaagatcttgttttggagcatcattccaatattatcccatctcaatatacagattatgat
tactatagttcttcctggaataagcccgtaattttgacgacagcagttcgtctgttcgat
gtgatgtttaaagatcgaacaacggatgtacgcaggtttcatcagttagccgactctgta
ctcattatagatgaagctcagaaaataccagttcaaacaatatcgatgtttaatgaaatg
atgaactttcttgcttataattgtaatactacggtggtattatgtacggcaacacagcca
ttattggaaactaccacctatcctatcaagttggcttcagaatctgaaattgtaaaacag
acaaaggaaatgcaggaacaatttaagcgtgtccatatagaagatgcctgtcgcaggggc
ggctattcaattgctgatttatcagattttatatttcaaaagctgcagcccggctgcagc
atgctggtgattgtcaatacaaaagcagaggcactaaatttatatcgagcttgtgagcag
catcatgaaatagacggacttcatctatatcatttatctactagcatgtgtccggagcat
cgccaccttacattggaggatttaaaagagcatatggaacaaaaagatactgtgttgtgt
atagcgactaatctgatcgaagcaggagtcgatatagattgtgatgttgtcatacgttcc
ctatgcggacttgatagtattcttcaggctgctggcagatgcaatagaaatggtaaaaat
tcagagttagggactgtctatctcatcaattccaatgaagaacatatcgaaaaacttaag
gatgtaagaaaaggacagaatgaaacagatattttattatcacaactacatgcttccaaa
gagggaaaccgtgtggatgagcttttaacactccccttcatacgtcagtattatgattcc
tatttgtttgatcgcagacaggatacggaatattcaacaaagattgagaatcgtaaagtt
tccttatttgatctattttcgcgaatagggagtaaaaaggaatctgatgatcttgctcat
ccttgtctggggcacgcattaaagagtgcgggagaaaaatttgaaatgattgattctcag
agtattggtgttttggttccgtacaaagatggcgagaaattgattaatcagctgaatagt
tccattagcaatgcagaaaagtatgcactgcttgataagacacagcgctttatggtgaat
gtttatgaacacaagtataaggagctggagaaggaagatatgatttatcagcttgagttt
aacggcatgctggttttgagggatgggttttataagaaggatacagggttggaggttagg
aaggagttagaggatatgtttgtgtaa

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