Cruoricaptor ignavus: IMZ16_00960
Help
Entry
IMZ16_00960 CDS
T06873
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
civ
Cruoricaptor ignavus
Brite
KEGG Orthology (KO) [BR:
civ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
civ03400
]
IMZ16_00960
DNA repair and recombination proteins [BR:
civ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IMZ16_00960
Archaeal homologous recombinant proteins
IMZ16_00960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
AAA_23
AAA_21
AAA_27
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QOR74049
UniProt:
A0A7M1T2L6
LinkDB
All DBs
Position
complement(208675..211716)
Genome browser
AA seq
1013 aa
AA seq
DB search
MIPLKLTMEGLYSYQEKQTIDFTSLTDAGLFGVFGSVGSGKSSILEAITFALYGETERMN
KRDNRAYNMMNLKSSKSFIEFDFINFENRIFRIIRDFRRNSKKFDDVKTQTPTFYEKIDG
NFIPLAHTDAARIINLSYTNFKRTIIIPQGQFKEFIELGATDRTKMMKEIYPELEKFDLY
HKASKLNDENKSALDVLMGTLAGFEGISQENINLLEEDLGKEKDSLKTLRDVFTPISEHF
NKLKTLKDDFNNLETKQNELDVKNEEKIAIDELAKETAEYEKIHQIFFQKFEDRKRTEKE
YDGKNALLTSETENLGNLNKELEKITKKIDELKEDFENLPTKRKEEIDLQKIIEIKRLEK
EESDLESDKKAKLENQPDLLKKKVDLEKNIEKTESEINELNKNILDAELLLVINNWFSAR
KNFQDDLIKLKNDGKSRKDEILRLNRELEILGIDPKKVEINFDLEKDKLKERRETMNLRK
SNFDLRTQLSKYAEHLHNGEACPLCGSDEHPKIIEIEDLTAEKASLKRDFENLENDETKL
ADLEKKVDKIFHDRRFYQEQFNIAKEKYGETEKELNKHKETFIWKQFDAENEDNFMAARD
LSNNNQKEISTRQKAIKKNREDLKDTDIKLQEITDAIKDIDIKIGRIQGQIAQNSSQIQL
LKLQDFKEKTLVEVQDLFNQNLAKNNQLEKDLLELENSKKEILPKITASETRKNTLEDDV
KRLDGEKTSVQDQILQLISDHQIESEEFISSVLAEGIDVIANNETIKNFNIAYGILKSSI
AELEKKLKDLSFSEEEFSASETKFNEASKNVDEANRVVIQKEAELSRQKGELQKMKEHLD
KKEALEKRALNLSKMINLFKGSGFVEYVSSIYLGNLCDNANERFHKMTRNQLSLRVNESN
DFEIIDYLNDGKSRSVKTLSGGQSFQVSLSLALALAESVQSHAKADRNFFFIDEGFGTQD
QESVNIVFETLMNLQKENRIVGIISHVEELKEKIPVSLSITKDAERGSLIEMV
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgattccattaaaattaaccatggaaggtctgtattcttatcaggaaaagcagactatc
gatttcacatcactcacagatgcaggtcttttcggtgtttttggctctgttggctctgga
aaatcgtcgattttagaagcgattacttttgcactttatggcgaaaccgaacgcatgaac
aaaagagataatagagcctacaatatgatgaacctgaaatcatcgaaatcttttattgaa
tttgatttcatcaattttgaaaacagaatttttagaattatcagagattttagaagaaac
agcaaaaaatttgacgatgtaaaaacccaaacccccactttttatgaaaaaatagatggt
aatttcattcctttggctcataccgacgctgccagaatcatcaatttaagttatacgaat
ttcaaaagaaccatcattattccgcaaggtcagtttaaagaatttatagaattgggcgca
acggaccgaaccaaaatgatgaaggaaatttatcccgaactcgaaaaattcgacctctat
cacaaagcaagtaaattaaacgatgagaacaaatctgctcttgatgtattgatgggaaca
ttggcaggttttgaaggaattagtcaggaaaatattaatcttttagaagaagatttaggt
aaagaaaaagacagtctgaaaactttgcgcgatgtttttacacccatttcagagcatttt
aataaacttaaaactttgaaagacgattttaataatcttgaaacaaagcaaaacgaattg
gatgttaagaacgaagaaaaaattgcaatcgatgaactcgcaaaagaaactgccgaatat
gaaaaaatccaccaaatattttttcaaaagtttgaagacagaaagcggactgaaaaagaa
tatgatggaaaaaatgctttgctgacttcggaaacggaaaatttggggaatttaaacaaa
gaactggaaaaaataaccaagaaaattgatgaattaaaagaagatttcgaaaaccttccc
acgaaaagaaaagaagaaattgatttgcagaaaatcatcgaaattaaaagattggaaaaa
gaggaaagtgatttagagtccgacaaaaaagcaaaactggaaaatcaacctgatttactt
aaaaagaaagtagatttagaaaaaaacattgaaaaaacagaaagcgaaatcaatgaatta
aacaaaaatattctggatgccgaacttttgctggtgataaacaactggttcagcgcacga
aagaactttcaggatgatttgattaaacttaaaaacgatggaaaatcgcgcaaagatgaa
attcttcggcttaacagagaactcgaaattcttggaattgatcccaaaaaagtggaaata
aatttcgatttggaaaaagataaactaaaggaacgtcgggaaacgatgaatcttcgcaaa
tcaaattttgatttgcgaactcaactttcaaaatacgctgagcacttgcacaatggcgaa
gcgtgtccactttgcggatccgatgaacacccgaaaattatcgaaatagaagatttaacg
gcagaaaaagcatctttgaaaagggattttgaaaatctggaaaatgatgaaacaaaattg
gcagatttggaaaagaaagtggacaagatttttcatgaccgcaggttttatcaggagcag
ttcaatattgccaaagaaaaatatggcgaaacggaaaaggaactgaataaacataaagaa
acctttatatggaaacagtttgatgctgaaaacgaagacaattttatggctgcgagagat
ttatcaaacaataatcaaaaggaaatttcaacccgacaaaaagcaatcaaaaaaaacaga
gaagacctgaaagatacagacataaaacttcaggaaattaccgatgctattaaagatatt
gacattaaaattggtcgaattcaaggacagattgcacaaaatagttctcaaattcaactt
cttaaacttcaagacttcaaagaaaaaactttggtggaagtccaagatttattcaatcaa
aatcttgctaaaaacaatcaattagaaaaagatttgctcgaacttgaaaactccaaaaag
gaaattctacccaaaataacggcttccgaaacaaggaaaaacactttggaagatgatgta
aaaagattggatggagagaaaacatcagttcaagatcaaattttgcaattaataagtgat
catcaaattgaaagtgaagaatttatttcaagtgttttggccgaaggaatagatgtaatt
gccaataacgaaacaataaaaaatttcaatatcgcatatggtattttgaagtcatctatc
gctgagttagagaagaagttgaaagatttgtcattcagcgaagaagagttttccgcatca
gaaacgaaattcaacgaagcaagtaaaaatgtagatgaggcaaatagagtagtcattcaa
aaagaagccgaattgagccgtcaaaaaggcgagttgcaaaaaatgaaagaacatctggat
aaaaaagaggcgctggaaaaacgggcattaaacttatccaaaatgattaatctcttcaaa
ggttctggatttgtagaatatgtttcttccatttacctcggcaatttgtgcgacaacgcc
aatgaacgctttcacaaaatgacgagaaatcaactcagtttgcgtgtcaacgaaagcaac
gatttcgaaattatagattacttaaacgacggtaaatcgcgcagtgtaaaaactttgtcg
ggagggcaatcttttcaggtttcgctttcgcttgccttggctttggctgaaagtgtgcag
agtcatgcaaaagccgaccgaaatttcttttttatagacgaaggtttcggaacccaagat
caggaatctgtgaatattgttttcgagacattaatgaacttacagaaagaaaatcgaatt
gtcggcatcatttctcatgtggaagaactgaaggaaaaaattcctgtttcgctttccatt
accaaagatgcagaacgaggaagtttgattgaaatggtttaa
DBGET
integrated database retrieval system