Cruoricaptor ignavus: IMZ16_02670
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Entry
IMZ16_02670 CDS
T06873
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
civ
Cruoricaptor ignavus
Pathway
civ03030
DNA replication
civ03430
Mismatch repair
civ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
civ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMZ16_02670 (holA)
03430 Mismatch repair
IMZ16_02670 (holA)
03440 Homologous recombination
IMZ16_02670 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
civ03032
]
IMZ16_02670 (holA)
03400 DNA repair and recombination proteins [BR:
civ03400
]
IMZ16_02670 (holA)
Enzymes [BR:
civ01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMZ16_02670 (holA)
DNA replication proteins [BR:
civ03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMZ16_02670 (holA)
DNA repair and recombination proteins [BR:
civ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMZ16_02670 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QOR74361
UniProt:
A0A7M1T3N3
LinkDB
All DBs
Position
complement(576073..577107)
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AA seq
344 aa
AA seq
DB search
MKDLEILLKNIKNKKLLPLYFLHGEEPFFIDQVTDALEQILPEEERDFGLTVVYGKDTNI
AEIVAQAQQFPMFGDTNMIIVKEAQDLKFSDEEKKILENFAQNPVPTSVLAFAHKHKKLA
GNTRLAKVLKSAGFLFESPAVKDYQVPQWISEEAARLQIKMAPNISLMLAEYLGSDLSRI
SNELSKVKMLMKDGEILDAKMVEKHIGISKEFNVFELQKALGQRDSARAMKIAHYIAKNP
KSSPFPMMLGNLYNFFSNIIIYQTRKGVDSKTVAAEMGVNPYFVKDFAQAANFYPFKLAT
RVISILREYDLKSKGLGVQQTPHEELLVEMVYKILNVDKVKVAV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttagaaatactgctcaaaaatattaaaaataaaaaacttctgccgctgtat
tttctgcacggcgaagagccttttttcatcgaccaagttaccgatgctttggagcaaatt
ttgccggaagaagagcgcgatttcgggctgacggttgtgtacggaaaagacacgaacatt
gcggaaattgtggcacaggcacagcaattcccgatgtttggcgatacgaatatgattatc
gtgaaggaagcccaggatttgaaattcagcgatgaggaaaaaaagattctcgagaatttc
gcgcaaaaccctgtgcccaccagcgttctcgctttcgctcacaaacacaaaaaattggcc
ggaaatacgaggcttgccaaagttttaaaatcggcaggatttctgttcgaaagccctgca
gtaaaggattatcaagtaccgcaatggattagcgaggaagcggcacggctgcaaatcaag
atggcgccgaatatttcgctaatgctcgccgaatatctgggcagcgatttatcaagaatt
tccaacgaactttctaaggtgaaaatgctgatgaaggatggcgaaattctggatgctaaa
atggtggaaaagcacatcggaatcagcaaggaattcaatgtgtttgaactgcagaaagcg
cttggacaaagggattcagcaagggcgatgaaaattgcgcactacattgcgaagaacccg
aaaagcagtccgtttccgatgatgctgggcaatctgtacaactttttttccaacatcatc
atttaccaaacgaggaagggcgtggattctaaaaccgtggctgcagaaatgggcgtaaat
ccttatttcgtaaaagattttgcgcaagccgccaatttttatccgttcaaattggcaacg
cgggtgatttccattttgcgggaatatgacttgaaaagcaaaggcttgggcgtacagcaa
acgccgcacgaagaacttctggtggaaatggtttacaaaattttgaatgtggacaaagtg
aaggttgctgtatga
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