Cruoricaptor ignavus: IMZ16_03695
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Entry
IMZ16_03695 CDS
T06873
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
civ
Cruoricaptor ignavus
Pathway
civ03420
Nucleotide excision repair
civ03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
civ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMZ16_03695
03430 Mismatch repair
IMZ16_03695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
civ03400
]
IMZ16_03695
Enzymes [BR:
civ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMZ16_03695
DNA repair and recombination proteins [BR:
civ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMZ16_03695
MMR (mismatch excision repair)
Other MMR factors
IMZ16_03695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOR74548
UniProt:
A0A7M1T3U5
LinkDB
All DBs
Position
complement(792447..794792)
Genome browser
AA seq
781 aa
AA seq
DB search
MEDYLKGLNEPQYEAVTTTEGPLMVLAGAGSGKTRVLTMRIAHLITNGVDPFNILALTFT
NKAAREMKDRIAKVVGTSNAKSIWMGTFHSVFARILRSEAHYLGFPANFTIYDTQDSLNV
LKKVIKEMNIDGDLYKPKKVMSRISNYKNNLITVKAYFENPELMEADERANMKFTGEIYR
RYVEQCFRNGAMDFDDLLLKTNELLTRFPEVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAAIVSLEQNYRSTQNIVNAANV
VIAKNKSQFKKNVFSENEPGEKIKVYRALSDADEAGFVATNIWDLHNSQQRHFSDFAILY
RTNSQTRAFEDALRKRNIPYRVFGGLSFYQRKEVKDLLAYLRLLVNENDTEALLRIINYP
ARGIGETTQNKLIAFADSQDVSVAKVLDNIGFYSQHLALNNAAITKLADFWAMIKSFQAM
LKTENVYTVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQQQLEDGDA
SLSGFLENIALSTDQDNKDDGGDKVSLMTIHLSKGLEFPVVHMVGLEENLFPSFMSSSTR
EELEEERRLFYVALTRAEKQAFFTYAVQRFQWGKITDAEPSRFLSEVDAEYLEFINPAVE
SRFVNHSGLRSSIFDDTPSMPRSFNKIQPKRKIRATDTPPHQAEKISPKLTPVASAKIIN
PSGKSSDNIEVGDKVRHDRFGIGEVKFLDGTDPENIKARVLFQNEGEKNLILKFAKLEKV
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttggaagactatctgaagggattgaacgagccgcagtatgaagcggtaactaccaccgaa
ggaccgctgatggtgcttgcaggcgcaggctcggggaaaacgcgcgtgctcacgatgcgc
atcgcacacctcatcacgaacggtgtggacccgttcaacattctggcgctcacctttacc
aataaagcagcccgcgaaatgaaggaccgcatcgccaaggtggtgggcacaagcaatgcg
aagagcatctggatgggaactttccactcggttttcgcacgcatcctccgcagcgaagcg
cactacctgggcttcccggcgaatttcacgatttatgatacgcaggattcgctcaatgtg
ctgaagaaagttatcaaggaaatgaacatcgacggcgacctctacaaaccgaaaaaggtg
atgtcgcgcatttccaattacaagaataacctcatcacggtgaaggcttatttcgaaaat
cctgagctgatggaggctgatgagagggcgaatatgaaattcacgggcgaaatttaccgc
cgctatgtggagcagtgctttcgcaacggcgcgatggatttcgatgatttattgctgaaa
accaacgagctacttacaagatttccggaagttctggcgaagtatcaggacaggttccgc
tatattttggtggatgagtatcaggatacgaaccattcccaatacctgattgtgaaggcg
ctggcctcgaagtttgaaaacatctgcgtggtgggggatgatgcacagtccatctactct
ttccgcggcgcgaatatttacaacatcctgaatttcaagaaggattatccggatgctgcg
atagtctcgctggaacagaactaccgctccacgcagaacatcgtgaatgcggccaatgta
gtcatcgccaaaaataaatctcagttcaagaaaaatgtgttttccgagaatgagcccggc
gagaaaatcaaggtttaccgcgcgctttccgatgccgatgaggcgggatttgtagccacg
aacatctgggatctgcacaattctcaacagaggcattttagcgatttcgcaattctctac
cgcaccaattctcagacccgtgcctttgaagatgccctaaggaagcgcaacattccgtac
cgcgttttcggcgggctcagcttttaccaaaggaaggaggtgaaggacctgctggcgtat
ctgcggcttttggtgaatgaaaatgatacggaagccctgctcagaatcatcaactatcct
gctcgtggaattggcgaaactacgcagaacaagctcatcgcctttgcagattctcaggat
gtttccgtggcgaaggttctggacaacatcggtttctactctcagcatttagccttaaac
aatgcggcgattacgaaacttgcggatttctgggcgatgataaagtcattccaggcgatg
ctgaaaaccgagaatgtgtacaccgtggcgatggaagtggcgaaacgcagcggcctcatc
aaattcctgaaggacgaccagacaccagaaggcatttcccgggtggaaaatgtgcaggaa
cttatgaactctatgcagggcttcatcgaagagcagcagcagctagaagacggcgatgca
tcgctatccggcttcctggaaaacatcgcgctttccacagatcaagacaataaggatgac
ggcggcgataaggtttcgctgatgaccatccacctttccaaaggcttggaattcccggtg
gttcatatggtagggctggaagaaaacctcttcccgagttttatgagcagcagcaccagg
gaagagctggaagaagagcggcggctattttatgtagcgctcacaagggcggaaaagcag
gctttcttcacctatgcagtgcagcgtttccagtgggggaaaatcaccgatgctgagcca
agccgttttctgagcgaagtggatgcagaatatctggaattcattaatccagctgtagaa
agccgcttcgtgaatcattctgggctaaggtcaagcattttcgatgacacgccaagtatg
ccgcgaagtttcaacaaaattcagccgaaaaggaaaattcgcgctacagatacgccgcca
catcaagcggaaaaaatttcacctaaattaacgccagtagcttcggcgaaaatcatcaac
ccaagcggcaaatcgagcgataatattgaggtgggcgacaaagtgcggcacgacagattt
ggcatcggcgaagttaagttcctggatggtacagatcctgaaaacatcaaagcccgcgta
ctcttccaaaatgaaggcgaaaaaaacctgatactaaagttcgcaaagctggagaaagtg
gagtga
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