Cruoricaptor ignavus: IMZ16_04520
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Entry
IMZ16_04520 CDS
T06873
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
civ
Cruoricaptor ignavus
Pathway
civ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
civ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMZ16_04520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
civ03019
]
IMZ16_04520
03400 DNA repair and recombination proteins [BR:
civ03400
]
IMZ16_04520
Enzymes [BR:
civ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMZ16_04520
Messenger RNA biogenesis [BR:
civ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IMZ16_04520
DNA repair and recombination proteins [BR:
civ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IMZ16_04520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
OmdA
Motif
Other DBs
NCBI-ProteinID:
QOR74700
UniProt:
A0A7M1T4E1
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All DBs
Position
947458..949377
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AA seq
639 aa
AA seq
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MCSIFYFYKKLLSLPAKSHILKTFWGYEHFREPQDKIIDAVISGKDTLAILPTGSGKSLC
YQVPALMLSGCCIVISPLLALMKDQVIQLQGLGIEAQLLSAETDSLKQDLIYSSCKNGQT
KLLYISPERLGDKKFLANAAEIPISFLAVDEAHCISEWGQDFRPAYLRIKNFREVYANVP
IIALTATATKKVSHDIVSQLGLRSPIIYNQNPERNNLNIYHKKSADKYQEILNFLKYTSK
SGIIYVRTRGEAENLFNFLKTNKIPEINFYHAGLPYRERTERQTEWQNSETAVIVATNAF
GMGIDKENVGFVIHHTPPQSIENYYQEIGRAGRGKQDADTILFWNEEDLKQRDEIFAGQI
AERDQFVKILKSLYSTYQIAEHELPDATFEFNYNKIQTQTGEKRAIIKNILAFLHRQEVI
FFDESSSKSCIQLSFDPQQLHLLAPKDAWFAEQLLRSLPGIQSGDAYFNEDFLVQKLNTE
KKILKSRLRELELKNLLKYTDGNNATIKFLSPREDRFFEGKYWKNYKETQRNKLQKWEEM
KYFILENHFCKMQMILKYFGGKSQKKCGRCSVCLRNSYKIFSSSVKDDLLRFLKQKPASA
EEIFAALSRHQRQDILENLILLLNSEQIFMVDHRTYALT
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcattttttatttttacaaaaaactattaagcttgcctgccaaatctcatata
ttaaaaactttctgggggtatgaacatttcagggagccgcaggataaaattatagacgct
gtaatctccggcaaggacaccctggccattttaccgacgggcagcggaaaatctctctgc
taccaagttcctgctttaatgctgagtggctgctgcatcgtaatatctcccctgctcgct
cttatgaaagatcaggtgatccagcttcaaggcttgggtatagaagcgcaattactctca
gcggaaacggatagcctgaagcaggacttgatttacagcagctgcaaaaacggacagaca
aaattgctatacatctccccggaacggctcggagataagaagtttttagctaatgcggca
gaaattcccatatcctttcttgcagtggatgaagctcattgcatctccgaatgggggcaa
gattttcggccggcttatcttcggatcaaaaattttcgggaggtatatgcaaatgtgcca
ataattgcactgacggctactgccacaaaaaaagtttctcacgatatagtctctcaattg
gggctgagaagcccaataatttataaccaaaaccctgaaaggaataacctaaatatttat
cataaaaaaagtgcggataagtatcaggaaattcttaatttcttaaaatacacatccaaa
tccggaatcatatatgttcgcaccaggggcgaagctgaaaatttatttaattttctaaaa
accaacaaaattcccgaaataaacttttaccacgcaggcctcccctatcgagaaagaacc
gaacggcaaactgagtggcaaaactccgagacagccgtaatagtggcaactaacgccttt
gggatgggcattgataaagaaaatgtaggtttcgtaatccaccacactcctccgcagtcc
attgaaaattattaccaggaaattggccgagctggccgcgggaaacaggatgcggatacc
atccttttttggaacgaagaagatttgaagcagagagatgagattttcgctgggcagatt
gctgaaagggatcaatttgtgaaaattttaaaaagcctctattccacttaccagatcgct
gaacacgaactgcccgatgccaccttcgagttcaattataataaaattcaaacacaaact
ggtgaaaagagagcgattattaaaaatattcttgcctttcttcaccgtcaggaagttatt
ttttttgatgaaagttcatcgaaatcctgcatccagctgtcatttgaccctcaacaatta
cacctgctggcgccaaaggatgcctggtttgcggagcagctgctgcggagcctcccggga
atccaatccggggatgcatattttaacgaagattttctagttcaaaaacttaacacggaa
aaaaaaattctcaagtccaggctaagagaattggagcttaaaaatctcctaaaatacacg
gatggaaacaatgcaaccatcaaatttctcagcccgagggaagatcgtttttttgaaggc
aagtactggaaaaattacaaggaaacgcagcgcaataaactgcagaaatgggaggaaatg
aaatattttatacttgaaaatcatttttgcaaaatgcagatgatactgaaatatttcggc
ggtaaatcacaaaaaaaatgcggaagatgctcagtctgcttaaggaattcttacaaaata
ttttccagctcagtaaaggatgatttactgagatttttaaagcagaaacctgcttctgca
gaggaaattttcgcagcgttaagcaggcaccaaaggcaggacatcctggaaaacctcatc
ctgctgctgaacagcgaacagatctttatggtagatcaccgtacatatgcactgacatag
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