Caulobacter inopinatus: ABOZ73_09730
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Entry
ABOZ73_09730 CDS
T11542
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ciw Caulobacter inopinatus
Pathway
ciw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ciw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABOZ73_09730 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ciw03019
]
ABOZ73_09730 (pnp)
03016 Transfer RNA biogenesis [BR:
ciw03016
]
ABOZ73_09730 (pnp)
Enzymes [BR:
ciw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABOZ73_09730 (pnp)
Messenger RNA biogenesis [BR:
ciw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABOZ73_09730 (pnp)
Transfer RNA biogenesis [BR:
ciw03016
]
Prokaryotic type
tRNA degradation factors
ABOZ73_09730 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
XDO95110
UniProt:
A0AB39KMS8
LinkDB
All DBs
Position
complement(2089482..2091626)
Genome browser
AA seq
714 aa
AA seq
DB search
MFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKTQKPGQDFFPLT
VNYQEKTFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQH
DLENDPDILAMVAASAALTLSGAPFMGPIGAARVGYINGEYVLNPTLDELKESVMDLVVA
GTNDAVMMVELEIKELTEEVVLGGVNFAHAQMQPVIDAIIELAEHAAKEPFDFTPEDTDA
IKAEMKGLVGADIAAAYKIQKKQDRYEAVGAAKKKAIAAMGLSDTNPAGMDVNKLAGVFK
ELEADVVRRGILDTGLRIDGRTVDKVRPILGEVGILPRTHGSALFTRGETQAIVVATLGT
GDDEQFIDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPAK
EDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLILENDGFAVL
SDILGDEDHLGDMDFKVAGTSEGITSLQMDIKIAGITPAIMEQALKQAKAGRDHILGEMN
KAMDAPRDSVGDFAPKIETISIPTDKIREVIGSGGKVIREIVEKTGAKVDISDDGTVKVS
ASEAAKIEAAVKWIKSITQEAEVGAIYDGKVVKVVDFGAFVNFFGAKDGLVHVSQISNER
VSKPSDVLTEGQMVKVKLLGFDDRGKTKLSMKVVDQETGEDLSKKEEPKEDAEA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagaccatcgagtggggcggcaagacgctcgtcctcgaaacc
ggccgcatcgcccgtcaggctgacggcgccgtgctggcgaccatgggcgaaaccgtcgtc
ctcgccaccgccgtcttcgccaagacgcagaagccgggccaggacttcttccccctgacg
gtcaactatcaggaaaagaccttcgccgccggcaagatcccgggcggcttcttcaagcgt
gaaggccgtccgtcggaaaaggagaccctggtctcccgcctgatcgaccgtccgatccgc
ccgctgttcgtcaagggcttcaagaacgaagtccaggtggtcgtcaccgtcctgcagcat
gacctcgagaacgatcccgacatcctggccatggtcgcggcttccgccgccctgaccctg
tcgggcgctccgttcatgggcccgatcggcgccgcgcgcgtcggctacatcaacggcgaa
tacgtgctgaacccgacgctcgacgagctgaaggaaagcgtcatggacctggtcgtcgcc
ggcaccaacgacgccgtgatgatggtcgagttggaaatcaaggaactgaccgaagaagtc
gtcctcggcggcgtcaacttcgctcacgcccagatgcagccggtgatcgacgcgatcatc
gagctggccgaacacgccgccaaggagcctttcgacttcacgccggaagacaccgacgcg
atcaaggccgagatgaagggcctcgtgggcgcggacatcgccgccgcctacaagatccag
aagaagcaagaccgctatgaagccgtcggcgccgccaagaagaaggcgatcgcggccatg
ggcctgtcggacaccaatccggccggcatggacgtgaacaagctggccggcgtgttcaag
gaactggaagccgacgtcgttcgtcgcggcatcctggacaccggcctgcgcatcgacggc
cgcaccgtcgacaaggtccgtccgatcctgggcgaagtgggcatcctgccccgcacccac
ggctcggccctgttcacccgcggcgaaacccaggcgatcgtggtcgccaccctgggcact
ggcgacgacgagcagttcatcgacgccctggaaggcacctacaaggaatccttcctgctg
cactacaacttcccgccctactcggtgggtgagaccggccgcatgggctcgcccggccgc
cgcgaaatcggccacggcaagctggcctggcgcgccatccgtccgatgctgccggccaag
gaagacttcccgtacacgatccgtctggtgtcggagatcaccgagtccaacggttcgtcc
tcgatggccacggtctgcggttcgtccctggccatgatggacgccggcgtgccgctggtc
cgtccggtctcgggcatcgccatgggcctgatcctggaaaacgacggcttcgccgttctg
tccgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgccggcacc
tcggaaggcatcaccagccttcagatggacatcaagatcgccggcatcacgcccgccatc
atggaacaggccctgaagcaggcgaaggccggccgggaccacatcctgggcgagatgaac
aaggccatggacgctcctcgcgacagcgtcggcgacttcgctccgaagatcgaaaccatc
tcgatcccgaccgacaagatccgtgaagtgatcggttcgggcggcaaggtgatccgcgag
atcgtcgagaagaccggcgccaaggtcgacatcagcgacgacggcaccgtgaaggtctcg
gcctcggaagcggccaagatcgaagccgccgtgaagtggatcaagtcgatcacgcaggaa
gcggaagtcggcgcgatctacgacggcaaggtcgtgaaggtcgtggacttcggcgccttc
gtgaacttcttcggcgccaaggacggcctcgtccacgtcagccagatcagcaacgagcgg
gtctccaagcccagcgacgtgctgaccgaaggccagatggtcaaggtgaagctcctgggc
ttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgaccaggagaccggcgaa
gacctgtccaagaaggaagagccgaaggaagacgcggaagcctaa
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