Citrobacter sp. XT1-2-2: M4I31_00230
Help
Entry
M4I31_00230 CDS
T09034
Symbol
dagR
Name
(GenBank) transcriptional regulator DagR
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cix03000
]
M4I31_00230 (dagR)
Transcription factors [BR:
cix03000
]
Prokaryotic type
Helix-turn-helix
Other families
M4I31_00230 (dagR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
Mg_chelatase
NACHT
AAA_16
AAA_14
RuvB_N
AAA_2
IstB_IS21
AAA_24
HTH_Crp_2
AAA_25
TrmB
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UQX59432
LinkDB
All DBs
Position
47214..50012
Genome browser
AA seq
932 aa
AA seq
DB search
MRRIEIILGELERLTRGLNLAQLAQETAFTAEAIGFNLGLARNSVSKDLNQLWNDGLAIK
SRGRPVFFLHRQTIETLLGRKLDESEREVQTVADLLPVQEAQATDDPFFGLIGYDRSLRD
AVEKGRAAVLYPHGLHVLLTGPSGVGKTFFAELMHRFACERATGTSPPLVYFNCAEYAHN
PELLSSHLFGHRQGAFTGANENKPGLVEQADGGYLLLDEVHRLPYEGQEKLFSILDKGEY
RPLGSSAVARSISVRLICATTEPVSSALLRTFQRRIQVCIDLPGIRQRSVEEQVELIVGF
LQRESRKIERTISIDRTLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEHSDTLQLD
KRLAEMPFNATPEQRLLVGALFEGKEHLSIDARTLPALKNSLATGAEIEESDLFYSFLTR
EYINLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEERVTLLIGCVEQ
VLGFTLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYENATLLCRKINEL
LHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILIAHGATTATSQAQYVNRVLEREL
FSAIDMPFEQSVHDTLEALTQMIQARQYRRLILMVDIGSLVHFGSTISKLFQIDVLLMPN
ITLTSLLEVGLDLSYETSELPQLAALMQSKNIPCQLCTPQQENSGKVLVISCITGMGTAE
KIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQAINASERLAGIVGTFQPGLPDIPF
ISLEELFSEQGPELVLSLLTPDLSSSERRLEMERSAMRFISALTMESIINHISVLNPQRI
LKEMEGVLNHLTTVLSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALENKPDLDIRAF
SVIKSAFLPIEEAYAIRLSDAEYFYIYELLYS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagacggattgagataatactgggagagctggaacggctgacgcgaggactgaatctt
gcccaactggcgcaggaaacggcgttcaccgcggaggccatcggctttaatcttgggctg
gcgcgtaactcggtcagtaaagatctcaatcaactctggaatgacggtctggcgattaaa
agtcgcggacgtccggtattctttctgcatcgtcagacgattgaaacgctgctgggacgc
aaactggatgagtccgagcgcgaagtgcaaaccgttgccgatctgttgcctgttcaggaa
gcccaggcgacagacgatccctttttcggcctgattggttacgatcgcagtctgcgcgat
gcggtggaaaaaggccgcgcggcggtgctttatccccacgggctgcacgttctgctgacc
ggtccttccggcgtgggcaaaacctttttcgccgaactgatgcaccgttttgcctgcgaa
cgcgcaacgggaacatcgccgccgctggtctattttaactgcgcggaatacgcccataac
ccggagctgctctcgtcccatttatttggccatcgacagggggcctttaccggcgcaaat
gagaataaaccgggtctggtcgagcaggctgacggcggttatctgctgcttgatgaagtg
catcgcctgccgtatgaaggtcaggaaaagctgttctcaattctcgacaaaggcgaatac
cgaccgctcggctcaagcgccgtggcgcgttctatttcggtccgtctgatttgtgcaacc
accgaaccggtcagctcggcgctgctgcgcaccttccagcgacgtattcaggtgtgcatc
gatttacccggcatccgccagcgctcggtggaagagcaggttgaacttatcgtcggcttt
ttacagcgtgagagccgtaaaatcgaacgcacgataagcatcgaccgtaccctgctgctc
tggctgctgaataagccgctggaaggcaatattggtcagctcaagagcgacattcagttt
ctctgcgcccaggcctgggcctcggggatgacggaacacagcgatacgctacagctggat
aaacgtctggcagaaatgccgtttaacgccacgccggaacaacgcctgctggtgggagcg
ctgtttgaaggcaaagagcacctaagcatcgacgcccgtacgctgcccgcactgaaaaat
tcgctggcgaccggagccgaaattgaagagagcgatctcttttacagcttcctgacccgg
gaatatatcaacctgcgtaacagcaatgttccgccagctgaaaccctggcgatacttaaa
aacaaactcagctcgatttttgaatacggtctctacagccgcgacagcgtggcgcatccc
ccgcgctatggcgatcagatagaagaacgcgtgacgctgctgatcggctgcgttgagcaa
gtgcttggtttcacgctgccggagaatctggttaacccgctgcgcaaacactttctggcg
ctgattggctacgtgcagcgcgggcttattccccagctttattcttccagtctgatcctc
gaccgctgtaaagatgaatacgaaaacgccacgctgttatgccgaaaaatcaacgaactg
ctgcatattcagtgtccggcgacggaggtggtctggctgtgtctgttcctcaaagagtgt
cggcattaccgccaacgaattgacgccagcccggactgcggggtgattttgattgctcac
ggcgcgacgaccgccaccagccaggcgcagtatgtgaatcgcgtgctggagcgcgagctg
ttcagcgctattgatatgcctttcgagcagtcggtgcatgatacgctggaagccctgacg
cagatgatccaggcccggcaatatcgccgactgatcctgatggtggatattggctcattg
gtccattttggcagcacgatcagcaaattattccagatagacgttctgttgatgccaaat
attacgctcaccagcttgttggaggtaggactggatttaagctatgaaaccagtgagtta
ccgcagctggcggcattaatgcagagcaaaaatattccctgtcagctctgtacgccgcag
caggaaaacagcggtaaagtgctggtcatctcctgtattaccggtatgggtacggcggaa
aaaatcaaaaaggtgctggaagagagcttcggcgagctgatgtcgcaggacacgcggatg
gtgatcctcgactataacgaagtccgcagcctggagcgcgttcagcaggcgattaacgcc
agcgagcgtctggcggggatcgttggcactttccagccgggactgccggatataccgttt
atctcgctcgaggagttgttctctgagcagggacccgaactggtgctcagcctgttgacg
ccggatctctccagcagtgaacgtcgtctggagatggagcgcagcgcaatgcgtttcatc
agcgcgttgaccatggaaagcatcattaaccacatttcggtgcttaacccgcagcgcatt
ctgaaagagatggaaggtgtgctgaatcatctgaccaccgtgctttcgctaaaaccgagc
cgccaggtgacactgcgcttcctgatccactgctgctgtatggttgagcgtatcgtgatt
aaccgcaaaccgttacagatggcgttagagaacaagccggatcttgatatccgcgcgttt
agtgtcattaaatcggctttcctgccgatcgaagaggcctatgccattcgcttatcggac
gcggaatatttttatatctacgaactgctgtatagctaa
DBGET
integrated database retrieval system
