Citrobacter sp. XT1-2-2: M4I31_04565
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Entry
M4I31_04565 CDS
T09034
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M4I31_04565 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_04565 (recC)
Enzymes [BR:
cix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M4I31_04565 (recC)
DNA repair and recombination proteins [BR:
cix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M4I31_04565 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
NLE
Motif
Other DBs
NCBI-ProteinID:
UQX60237
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All DBs
Position
933933..937301
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AA seq
1122 aa
AA seq
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MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLAQKFGIAANI
DFPLPASFIWDMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDNDDFALLRHYLTDDTD
KRKLFQLSSRAADLFDQYLVYRPDWLTQWEAGRQIEGLGEAQAWQAPLWKALVEYTAELG
QPRWHRANLYQRFIHTLENASECPQGLPSRVFICGISALPPVYLQALQALGKHIDIHLLF
TNPCRYYWGDIKDPAWLAKLLARQRRHSFEERHLPLFRDTQNAAGLFNSDGEQDVGNPML
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHNIQSDILELQSRAVAGVTLDEYSR
SDNKRLLDVNDSSVTFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPADRYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNIDEDGLRYLRLWVNESGIRWGIDDDNVRELELPPTGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNLWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIITEGLGAEYGDAVPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELMDYIGQSHYLPGDESLTCDQSEARVKAHI
TCLHTRMPFDAQNYQPGEQQSYAREWLPAASLSGKAHTDFVQPLPFEMPATLTLETLQRF
WAHPVRAFFQMRLQVNFRSEESEIPETEPFVLEGLTRYQLNQQLLNTLVEENDAERLFRR
FRAAGVLPYGSFGEILWDTQRQEMQSLAERIIACRQPCQSMEIDLICNGVQITGWLPQVQ
EDGLLRWRPSLISIAQGVQLWLEHLVYCASGGTGESRLFLRKDGEWRFPPLAAEQALLYL
SQLIEGYREGMSSPLLVLPESGGAWIKTCYDAANDAMLEDDDTLQKARSKFLQAYEGNMM
VRGEGDDIWYQRLWRQLDAETLERIVLQSQRYLLPIFRFNQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttaatggagtttatc
gttgagcgcgagcggttggacgatccctttgagccggaaatgatcctggtgcaaagcacc
ggtatggcgcagtggctacagatgacccttgcacagaaattcggtatcgccgccaacatc
gatttcccgctacccgcgagttttatctgggatatgtttgtgcgcgtgctgccggatatc
ccgaaagagagcgcgttcagcaaacagagcatgagctggaagttaatgactctgctgccg
caattgctggataacgatgacttcgcactgctgcgacactatctgacggacgacaccgat
aaacgtaagctgtttcagctttcctctcgcgcggcggaccttttcgatcagtatttagtt
tatcgccctgactggttaacgcagtgggaagcggggcgccagattgaaggactcggcgag
gctcaggcatggcaggcgccgttgtggaaagcgctggtggaatacaccgctgaactgggt
caaccgcgctggcatcgcgccaatttatatcagcgatttattcacaccctggaaaatgcg
tctgaatgtccgcaggggctgccttctcgcgtctttatttgcggaatttcggcgctaccg
ccggtttacctgcaggccttgcaggcgttgggtaagcacattgatattcatctgctgttt
accaacccttgtcgctactattggggcgacattaaagatcccgcctggctggcaaagttg
ctggcgcgtcagcgtcggcacagttttgaagaacgtcacctgccgctgtttcgtgatact
cagaatgcggcaggattgtttaacagtgatggtgagcaggatgtaggcaacccgatgctg
gcctcgtggggtaagttgggacgtgattatatttatctgctttcagaactggaaaacagc
caggagctggatgcgtttgtcgatataaccccagacaatcttttgcataacattcagtcg
gatattctcgagttacaaagccgggccgtggcgggcgttacgctggacgagtattcccgg
agcgacaacaaacgactgcttgatgtgaacgacagcagcgtgactttccatgtctgccat
agccctcagcgtgaagtggaaattcttcatgaccgactgctggcaatgctggaagcagat
cccacgctgacgccgcgcgacattatcgtgatggtggcggatatcgacagctacagcccg
ttcattcaggcggtttttggcagcgcgccagccgaccgttacttaccctatgcgatttcc
gaccgtcgggcgcgtcagtctcatcccgtcttgcaggcctttatcagtctgctgtcgctg
ccggatagccgttttgtctctgaggatgtgctggcattactggatgtacccgtgctggcg
gcacgtttcaatattgatgaagatggtctgcgctatcttcgtttgtgggtcaatgaatca
ggtattcgctggggaattgacgacgataacgtgcgtgagctggaacttccgccaacgggt
cagcatacctggcaatttggtttaacgcgcatgctgctcggctatgcgatggaaagcgcc
cagggcgagtggcaatcggtattgccctatgatgagtcgagcggtttgattgcggaactg
gtagggcatctggcctcgttgctgatgcagcttaatctctggcgtcgaggactggcgcag
gagcgcccgctggaagagtggctgcctgtttgtcgggacatgcttaatgatttcttcctg
ccggatgcggataccgaagcggcgatgacgctgattgaacagcagtggcaggccattatt
actgaaggactgggggctgagtatggcgatgccgtaccgctttccttgctacgtgatgag
ctggcgcagcgtctcgaccaggaacgcattagccagcgcttcctggcagggcccgttaac
atttgtacgctgatgccgatgcgctctattccttttaaggttgtatgcctgctgggcatg
aacgatggcgtttatccgcgtcagcttgcgccgctgggctttgatctgatgagtcaaaaa
ccgatgcggggcgatcgcagccgtcgcgatgatgaccgttatctgttcctcgaagcatta
atttcggcgcagcaaacgctctacatcagctacattggccgctcaattcaggataacagc
gaacgcttcccgtcggtattggtgcaggaactgatggattacatcgggcaaagccactat
ttgccgggcgacgaatcgttgacctgcgatcaaagcgaggcccgggtaaaagcgcacatt
acctgtctgcatacccgcatgccttttgacgcacaaaactatcagcctggcgaacagcaa
agctatgcccgggagtggctgcctgcggcgagcctgtcaggaaaagcgcacacggatttt
gtgcagcctctcccctttgaaatgccagccacgttaacgctggaaacgctacagcgattt
tgggctcatccggtacgggccttttttcagatgcgtttgcaggtcaactttcgttctgaa
gaaagtgagatcccggaaacagaaccttttgttctggaaggattaactcgctatcagctt
aatcagcaattgcttaacacgctggttgaagagaacgatgctgaacgactgtttcgccgt
tttcgtgcggcaggcgtgctgccctatgggtcatttggcgaaattctgtgggatacgcag
cgtcaggagatgcagtcgctggctgaacgcattatcgcctgccgtcagccttgccagagc
atggagattgatctcatctgtaacggtgtgcaaatcaccggttggttgccgcaggtgcaa
gaggacggtttgttgcgctggcgcccatctttgataagcattgcccagggggtgcaactt
tggctggaacatcttgtctattgtgccagtggcggtacgggagagagtcggttgttcctg
cgcaaagacggggaatggcgtttccctccactggcggcagaacaggcgctgctgtatttg
tcgcagctcattgagggatatcgggaaggcatgtcgtcgccattgctggtattaccagaa
agcggcggcgcatggataaaaacctgttatgacgctgcaaatgatgccatgttagaggac
gacgatacgttgcaaaaagcgcgcagtaagtttttgcaggcttatgaaggcaacatgatg
gttcgtggcgaaggcgatgatatctggtatcaacgcctgtggcgtcaactggatgccgag
acgctggaacgcattgttttacagtcacagcgctatctgttaccgatttttcgctttaac
cagtcctga
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