Citrobacter sp. XT1-2-2: M4I31_04880
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Entry
M4I31_04880 CDS
T09034
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cix03016
]
M4I31_04880 (truD)
Enzymes [BR:
cix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
M4I31_04880 (truD)
Transfer RNA biogenesis [BR:
cix03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M4I31_04880 (truD)
Prokaryotic type
M4I31_04880 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UQX60296
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All DBs
Position
1010728..1011777
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AA seq
349 aa
AA seq
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MTAFENLTYLHGKPLGHGVLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNVMPDLSKFELEGCKVLEYARHKRK
LRLGALKGNEFTLVLREVSERNDVEARLQAISERGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATQEE
QTELQRRVDDKELMITAALPGSGEWGTQRDALVFEESAVADETVLQSLLLREKVEASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAYIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgagaatctgacatatcttcatggtaaaccactgggccatggcgtcctg
aaagccaatccggaagactttgtcgtcgtcgaagatctaggcttcgaaccggatggcgaa
ggcgagcacattttggtgcgcatcctgaaaaacggctgcaatacccgttttgtcgctgac
gcgctggcgaagttcctgaaaattcacgcccgtgaagtgagctttgctgggcaaaaagat
aagcatgcggtcacggaacagtggctgtgcgcgcgcgtgccgggcaatgtaatgcctgat
ttaagcaaatttgagctcgaaggctgtaaagtgctggagtacgcgcgccacaagcgtaag
ctgcgtttaggggcgctgaaaggcaacgaatttacgctggtgctgcgtgaagtgagcgag
cgaaatgatgttgaagcgcgattacaggcgattagcgagcgcggcgtaccgaactatttt
ggcgctcagcgttttgggatcggcggcagcaacctgcaaggggcgctgcgctgggcgcaa
agcgatgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcccgtagc
gcgttgtttaatcagatcgtcagtgaacgcttgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattgtcgggacgcggaagctggtttgtcgccacgcaggaagaa
cagactgaattacagcgtcgcgtcgatgacaaagaattgatgattacagcggcattaccg
ggtagcggtgagtggggaactcagcgcgacgcgctggtgtttgaagaaagcgctgttgcg
gatgaaaccgtgctgcagtctctgctattgcgcgagaaagtcgaggcatcgcgacgcgct
atgttgctgtatccacaacaattaagctggaactggtgggatgacgtaaccgttgagtta
cgcttctggctaccggcaggtagcttcgccaccagtgtagtaagggaacttattaacaca
atgggtgattatgcgtatattgctgagtaa
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