Citrobacter sp. XT1-2-2: M4I31_05515
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Entry
M4I31_05515 CDS
T09034
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix00250
Alanine, aspartate and glutamate metabolism
cix00310
Lysine degradation
cix00350
Tyrosine metabolism
cix00650
Butanoate metabolism
cix00760
Nicotinate and nicotinamide metabolism
cix01100
Metabolic pathways
cix01120
Microbial metabolism in diverse environments
Module
cix_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
M4I31_05515 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M4I31_05515 (gabD)
00310 Lysine degradation
M4I31_05515 (gabD)
00350 Tyrosine metabolism
M4I31_05515 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
M4I31_05515 (gabD)
Enzymes [BR:
cix01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
M4I31_05515 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
M4I31_05515 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
M4I31_05515 (gabD)
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Motif
Pfam:
Aldedh
TilS
DUF1487
Motif
Other DBs
NCBI-ProteinID:
UQX60413
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All DBs
Position
complement(1149218..1150666)
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AA seq
482 aa
AA seq
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MQLNDPTLFRQQALIDGNWRDANNGETIAVTNPANGQQLGSVPKMGADETREAINAANRA
LPAWRALTAKERANILRRWFNLMIEHQDDLARLMTLEQGKPLAEAKGEITYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPYSALALAELANRAGIPAGVFSVVTGSASAVGNELTGNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDQFAEKLEQAVSKLRLGDGLQPDVTTGPLIDEKAVAKVQEHIADALDKGARIIAGGKP
HALGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaaacgatccaaccttatttcgccaacaggcgttgattgacggcaactggcgt
gacgccaacaacggcgagaccatcgcagtaacgaatcccgccaatggtcagcaattgggt
agcgtaccgaaaatgggggcggatgaaacccgtgaagccattaacgccgcgaaccgcgct
ctacccgcctggcgtgcgctgaccgccaaagaacgggccaatattctgcgtcgctggttc
aacctgatgattgaacatcaggacgatcttgctcgtctgatgaccctggaacagggtaag
ccgctggcggaagccaaaggcgaaatcacctatgccgcctcatttattgagtggtttgcc
gaagagggcaaacgcatttatggcgacacgatccccggccatcaggctgataagcgtctg
atcgtcatcaagcagccgatcggcgttaccgccgcgattacgccgtggaacttcccggcg
gcgatgatcactcgcaaagccggtccggcactggcggcgggttgcaccatggtgcttaaa
ccggccagccagaccccctattccgcgctggcgctggcagagctggctaatcgcgccggc
atcccggctggcgtattcagcgtggtgaccggttcagcaagcgcggtcggcaacgaactg
accggcaacccgctggtgcgcaaactgtcatttaccggctccaccgaaattggccgtcag
ctgatggaacagtgtgccaaagacatcaagaaggtgtcgctggagctgggcggcaatgcg
ccgtttatcgtctttgatgatgccgatctcgacaaagccgtggaaggcgcgctggcgtcg
aagttccgtaacgcggggcaaacctgcgtctgcgccaaccgtctgtacgtgcaggacggc
gtatatgaccagtttgccgaaaaactcgagcaggcggtgagcaagctgcgcctcggtgat
ggtctgcaaccagatgtcaccaccgggccgctgatcgacgagaaagcggttgccaaagtg
caggagcatatcgccgatgccctggataaaggcgcacgcattatcgctggcggtaaacct
catgcgctgggcgggaacttcttccagcccaccattctggtcgatgtacctgccaacgcg
aaggtcgccaaagaagagacattcggcccgctggcgccgctgtttcgctttaaagacgaa
gctgacgtcatcgcccaggccaatgacaccgagtttggcctggcagcctatttctacgcc
cgtgatttaagccgcgtcttccgcgttggcgaagcgctggagtacggcatcgtcgggatt
aacaccggcatcatctccaacgaagtcgccccatttggtgggatcaaagcctccggtctt
ggccgtgaaggatcgaaatacggcatcgaagactacttagaaatcaaatatatgtgtatc
ggcctttaa
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