Citrobacter sp. XT1-2-2: M4I31_05850
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Entry
M4I31_05850 CDS
T09034
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix02024
Quorum sensing
cix03060
Protein export
cix03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
M4I31_05850 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
M4I31_05850 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M4I31_05850 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cix02044
]
M4I31_05850 (ffh)
Enzymes [BR:
cix01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
M4I31_05850 (ffh)
Secretion system [BR:
cix02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
M4I31_05850 (ffh)
Eukaryotic Sec-SRP protein
M4I31_05850 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_16
AAA_31
AAA_24
Helicase_RecD
AAA_33
AIP3
GlnD_UR_UTase
T2SSE
APS_kinase
AAA_14
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
UQX60475
LinkDB
All DBs
Position
1236762..1238123
Genome browser
AA seq
453 aa
AA seq
DB search
MFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLKQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIATGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatcgtttgtcgcgcacgctgcgcaatatcagtggccgtgga
cgccttactgaagacaacgttaaagagacgctgcgcgaagtgcgcatggcgctgctggag
gctgacgtagcgctgccggtagtgcgtgagtttatcaatcgcgtaaaagagaaagcggtt
ggtcatgaagttaacaaaagcctgacgccgggtcaggaattcgtcaagattgtccgtaac
gagctggttgcggcaatgggcgaagaaaaccagaccctgaatctggctgctcagccgcct
gccgtcgtgctgatggcgggcttgcagggggcaggtaaaaccaccagcgtgggtaagctg
gggaaattcctgcgagagaagcacaagaagaaagtgctggtggtctccgcggacgtttat
cgcccggcggcgattaaacagctggaaacgctggccgagcaggttggtgtggacttcttc
ccgtcggatgtcggtcaaaaaccggtcgatatcgtcaacgccgcgctgaaagaagccaaa
ctcaaattctacgacgtgctgctggtggataccgccggtcgtctgcacgttgacgaagcg
atgatggacgaaatcaaacaggtccacgcttctatcaagccggtagaaacgctgtttgtc
gtcgatgcgatgaccggtcaggatgccgccaataccgcaaaagcctttaacgaagcgctg
ccattaaccggcgtggtgctgaccaaagttgatggtgatgctcgtggcggtgcggcgctt
tccattcgtcatatcaccggcaagccgattaaattcctcggcgtcggcgagaaaaccgaa
gcgctggagccgttccacccggatcgtattgcttcacgtattctcggcatgggcgacgtg
ctgtcgctgatcgaagatatcgaaagcaaagttgaccgcgcgcaggcagagaaattagcc
agcaagctgaaaaaaggcgacggcttcgatctcaacgatttccttgagcagctcaagcag
atgaaaaacatgggcggtatggcaagcctgatgggcaaactgccgggtatggggcagatc
cctgacaatgtgaaatcgcagatggacgataaagtgctggtgcgtatggaagccatcatc
aactcgatgacgatgaaagaacgcgctaagccggaaatcatcaaaggttcccgtaaacgc
cgtattgctaccggctgcggtatgcaggtacaggacgttaaccgccttctgaaacagttc
gacgacatgcagcgcatgatgaagaaaatgaagaaaggcgggatggcgaagatgatgcgg
agtatgaaggggatgatgccgccaggcttcccgggtagataa
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