Citrobacter sp. XT1-2-2: M4I31_06290
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Entry
M4I31_06290 CDS
T09034
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
M4I31_06290 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cix03019
]
M4I31_06290 (rnc)
03009 Ribosome biogenesis [BR:
cix03009
]
M4I31_06290 (rnc)
03036 Chromosome and associated proteins [BR:
cix03036
]
M4I31_06290 (rnc)
Enzymes [BR:
cix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
M4I31_06290 (rnc)
Messenger RNA biogenesis [BR:
cix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M4I31_06290 (rnc)
Ribosome biogenesis [BR:
cix03009
]
Eukaryotic type
90S particles
RNase
M4I31_06290 (rnc)
Prokaryotic type
rRNA processing factors
M4I31_06290 (rnc)
Chromosome and associated proteins [BR:
cix03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
M4I31_06290 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UQX60553
LinkDB
All DBs
Position
1312327..1313007
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEQLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gagctgttgcagcaggcattaactcaccgtagcgccagcagcaaacataacgagcgttta
gaatttttaggcgactctattttgagctttgtcatcgctaatgcgttatatcaccgtttc
ccgcgtgtggatgaaggtgatatgagccgcatgcgcgcgacgctggttcgcggtaatacg
ctggcagaattagcccgtgagtttgacctcggtgaatgtttacgtttggggccaggcgag
ctgaaaagcggcggtttccgtcgtgaatcgatcctggcggacaccgttgaagctttgatc
ggcggcgtcttcctcgacagcgatattcaaaccgttgaacaactgatcctgaattggtat
caaacccgtctggatgaaattagcccaggcgacaaacaaaaagatccgaaaacgcgcctg
caggaatatttgcagggtcgccacctgccgctgccgtcctacctggtggtgcaggtccgt
ggtgaagctcacgatcaagaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcgagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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