Citrobacter sp. XT1-2-2: M4I31_08030
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Entry
M4I31_08030 CDS
T09034
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_08030
DNA repair and recombination proteins [BR:
cix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
M4I31_08030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
AAA_16
zf-tcix
SLFN-g3_helicase
AAA_22
DUF7577
AAA
Zn_ribbon_3
UPF0547
TerL_ATPase
Motif
Other DBs
NCBI-ProteinID:
UQX60867
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Position
complement(1705170..1706930)
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AA seq
586 aa
AA seq
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MIFTLRPYQQEAVDATLNHFRHHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYCALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQGEFSLLIVDECH
RIGDDEESQYQQILTHLTNVNPHLRLLGLTATPFRLGKGWIYHFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
IISQIIEFAQTRKGVMIFAATVEHAKEILGLLPADDAALITGDTPGAERDVLIEEFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEVGAPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMV
LQNGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGIPLRWITA
ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatttttactcttcgcccgtaccaacaagaagccgtggacgccacgctcaaccatttt
cgccaccaccgcacgccggcggttatcgtcctgccaaccggcgcgggcaaaagcctggtg
atagcggaactggcccgcgtggcgcgtggtcgcgtgctggtactggcgcacgtcaaagag
ctggtcgcgcaaaaccacgccaaatattgcgcgttggggctggaggccgatatttttgcc
gccgggctgaagcgtaaagagagccatgggaaagtggtatttggcagcgtacagtcggtg
gcgcgtaatctggatgcctttcagggagagttttccctgctgatcgtcgatgaatgtcac
cgcatcggtgatgatgaagagagtcagtatcagcaaatcctcactcacctgaccaacgtc
aatccccacttacgcctgctggggcttaccgccacgccttttcgtctgggtaaaggctgg
atttaccactttcattatcacggaatggtgcgcggcgatgaaaaagcgctgtttcgcgac
tgcatttatgaattaccgctgcgctatatgattaaacacggctacctgacgccgccggaa
cgcctcgacatgccggtcgtgcagtatgatttcagccgcctgcaggcacaaagtaacggc
ctgttcagcgaggcggaccttaatcgggaattaaaaaagcagcagcgaatcacgccgcat
atcatcagccagattattgagtttgcccagacgcgcaaaggggtgatgattttcgccgcc
accgttgaacacgccaaagaaattctgggcctgctgcctgctgacgatgccgcgcttatt
accggagatacgccaggcgcggagcgtgacgtactgattgaagagtttaaagcccagcgc
tttcgctatctggtgaatgtgtcggtcctgactaccggcttcgatgccccacacgtcgac
cttatcgccattctgcgcccgacggaatcagtcagcctgtaccaacaaattgttggtcgc
ggactgcgcctggcccctggtaaaaccgactgtctgatcctcgattacgcgggtaatccc
cacgatctgtacgccccggaagtgggtgcgccgaagggaaaaagcgacaacgtgccggta
caggtgttctgccctgcctgcggatttgccaacaccttctggggtaaaacaacggctgac
ggcacgctgattgaacattttggtcgccgctgccagggatggtttgaagatgatgacggt
catcgcgaacagtgcgacttccgtttccgttttaaaaattgcccgcagtgcaacgcggaa
aatgacattgccgcccgccgctgccgtgaatgcgatacggtgctggtcgacccggatgat
atgctgaaagcggcgttgaggctaaaagatgcgctggtcctgcgctgtagcggtatggtg
ttacaaaatggccaggatgaaaaaggcgaatggctaaaaatcacctattacgatgaagac
ggggccgacgtcagcgaacgctttcgtctacacactcccgcgcagcgtacggcattcgaa
caactgtttattcgcccgcacacccgtacccccggtattcccttacgctggataaccgcc
gccgatatcctcgcccagcaggcgctgttacgccatcctgatttcgtggttgcgcgcatg
aaaggtcagtactggcaggtgcgtgaaaaggtcttcgattatgaaggtcgctttcgccgg
gcacatgaattacgcggttaa
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