Citrobacter sp. XT1-2-2: M4I31_13370
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Entry
M4I31_13370 CDS
T09034
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M4I31_13370 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_13370 (xthA)
Enzymes [BR:
cix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
M4I31_13370 (xthA)
DNA repair and recombination proteins [BR:
cix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M4I31_13370 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UQX57453
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All DBs
Position
2809451..2810257
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDHET
KFPAKAAFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMERLLGWGLVDTYRHAYPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAER
CEETGIDYEIRSMEKPSDHAPVWAKFRV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggcctgcgtgcccgtcctcatcaactggcagcc
attgtcgaaaaacaccaaccggatgtgattggcttacaggagacaaaagtccacgatgac
atgttccctctcgaagaggttgcaaagctgggttacaacgtcttttatcacggtcagaaa
ggtcattacggcgtggcgctgttaacgaaagaaacgccaatcgcggtgcgtcgtggcttc
ccgggcgatggcgaagaagcgcagcgtcgtatcatcatggcggaaatcccatcccctctg
ggcagcattaccgtgatcaacggctatttcccgcagggcgaaagccgtgaccacgaaacc
aaatttccggccaaggccgcgttttaccagaatctacaaaactatctggagactgaactg
aaacgcgacaatccggtcttgatcatgggcgatatgaacatcagcccaaccgatctcgat
atcggcattggcgaggaaaaccgtaaacgctggctgcgtaccggtaaatgttccttcctg
ccggaagagcgtgagtggatggagcgcctgctgggctggggcctggtggacacctatcgt
catgcttatcctgaaaaaaatgaccagttctcgtggtttgattaccgctccaaaggcttt
gatgataaccgtggcctgcgtatcgatctgctgttagcgagcaacccactggcggagcgc
tgcgaagaaaccggcatcgactatgagatccgcagcatggaaaaaccgtccgatcatgcg
cctgtatgggctaaattccgcgtctga
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