Citrobacter sp. XT1-2-2: M4I31_16125
Help
Entry
M4I31_16125 CDS
T09034
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cix
Citrobacter sp. XT1-2-2
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_16125 (phrB)
Enzymes [BR:
cix01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M4I31_16125 (phrB)
DNA repair and recombination proteins [BR:
cix03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M4I31_16125 (phrB)
Prokaryotic type
M4I31_16125 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UQX57951
LinkDB
All DBs
Position
complement(3368047..3369465)
Genome browser
AA seq
472 aa
AA seq
DB search
MTTHLVWFRRDLRLHDNLALAAACRDRSAQVLALYISTPGQWKAHDMAPRQAAFVNAQLN
ALQAALAEKGIPLLFHEVADFAASVDTVKRVCLQYDVSRLFYNYQYEINERQRDVNVEKS
LPQVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRIKDGIPECVSAPKMRESGA
LDAPLTSITLSYPQQDFDAQRFVAEEKLAIAQLRQFCQQAAGKYEQQRDFPAIDGTSRLS
ASLATGGLSPRQCLNRLLAEQPQALEGGAGSVWLNELIWREFYRHLMTYHPALCRYQPFI
RWTDRVQWQNNPTHLQAWQTGQTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRKGEQYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDRDGEFIRQW
LPELRDVPGKAIHEPWSWAEKAQVTLNYPRPIVDHKQARLATLAAYEAARKG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatttggtctggtttcggcgtgatttacgtctgcacgacaacctcgcgctg
gcggcggcttgtcgggatcgttctgcgcaggtgctggcgttatatatatctacccccggg
cagtggaaggcccacgatatggccccgcgtcaggcggcatttgtcaacgcgcagttgaat
gcgttacaagcggcgctggcagaaaaaggcatccctttactgtttcatgaagtggctgat
tttgcggccagcgtggacaccgtcaaacgtgtctgcctgcagtatgacgtcagtcgatta
ttttataactatcaatatgaaataaacgaacgacagcgtgatgtaaacgtagagaaatca
ttaccccaggtggtgtgcgaagggtttgatgacagcgtgatcctgcctcctggagcggtg
atgaccggcaatcatgagatgtataaagtgttcacgccctttaaaaatgcctggctgaag
cggattaaagacggtattccagaatgtgtgagcgcgccaaaaatgagagaaagcggcgct
cttgacgcaccgttaacatcaataacgctgagctatccgcagcaagattttgatgcccaa
aggtttgtggcagaggaaaaattggccatcgcgcaattacgccagttttgccagcaggct
gcgggaaaatacgaacagcagcgtgattttcccgcgattgacgggaccagtcgattatcc
gcaagcctggcgacaggcgggttatcgccgcgccaatgcctgaatcgactgctcgcagag
cagccgcaggcgcttgagggcggggcgggcagcgtctggctgaacgagcttatctggcgt
gaattttatcgtcatctgatgacgtatcatccggcgctgtgtcggtatcaaccctttatc
cgctggaccgatcgcgtgcaatggcagaataacccgacgcatttgcaggcctggcaaacg
ggtcaaacgggttacccgattgtggatgcggcgatgcgtcagctcaacgccacgggctgg
atgcataatcgtttacgcatgattacggccagttttttagtaaaagacctgctgatcgac
tggcgtaaaggggagcagtatttcatgtcgcaactgatcgatggcgacctggcggccaat
aacggcggctggcagtgggccgcatccaccggaaccgatgccgcaccgtatttccgcata
tttaaccccacgacgcagggcgaaaaatttgaccgtgacggtgagtttatccgccagtgg
ctgccggaattgcgcgatgtgccgggtaaagccatccatgagccgtggtcgtgggcggaa
aaagcgcaggtgacgctcaactatcctcgcccgattgtcgatcataagcaggccagactg
gctacgctggcggcatatgaggcggcgcgaaaagggtaa
DBGET
integrated database retrieval system
