Citrobacter sp. XT1-2-2: M4I31_16400
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Entry
M4I31_16400 CDS
T09034
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix00550
Peptidoglycan biosynthesis
cix01100
Metabolic pathways
cix01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M4I31_16400 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M4I31_16400 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cix01011
]
M4I31_16400 (mrdA)
Enzymes [BR:
cix01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M4I31_16400 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cix01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
M4I31_16400 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UQX57999
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Position
3421952..3423853
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AA seq
633 aa
AA seq
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MKLQNSFRDYSAESALFVRRALVAFLGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIK
LVPIPPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNIQDTLDALRNVVDLTDDDIAAFK
KERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVS
KINDKDVDRLDKDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLK
EVAPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVTDPRTGGVLALVSMPSYDPNLFVDG
ISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVITRNTGLFDPGWWQL
PGSEKRYRDWKKWGHGHLNITRSLEESADTFFYQIAYDMGIDRLSEWMSKFGYGQYTGID
LAEERSGNMPTREWKQKRFKKPWYQGDTIPVGIGQGYWTATPIQMSKALMILINDGLVKV
PHLLMSTAENGKQVPWVQPHEPPVGDIHSGYWEIAKDGMYGVANRPNGTAHKYFAGAPYK
IAAKSGTAQVFGLKANETYNAHKIAERLRDHKLMTAFAPYDKPQVAVAMILENGGAGPAV
GTIMRQILDHIMLGDNNTNLPAENPAVAAAEDQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacagaattcttttcgcgactattcggctgagtccgcgctgtttgtgcgccgg
gcgctggtggcttttttggggattttgctgctgaccggcgtgctgatcgccaacctgtat
aatctgcaaatcgttcgctttactgattatcagacccgttcgaacgaaaaccgcattaaa
ctggtacccattcctcccagtcgcggcattatttatgaccgtaacggaattccgcttgcc
cttaaccgcaccatttatcagattgaaatgatgccggagaaggtagacaacattcaggat
acgctcgacgcgctgcgcaacgtcgtagacctgacggatgacgatattgccgcgtttaaa
aaagagcgcgcccgttcacaccgcttcacctctattccggtaaaaaccaacctgacggaa
gttcaggtcgcacggtttgccgtaaatcaatatcgctttcctggcgttgaagttaaaggc
tataaacgccgctattacccttacggttccgccctgacccacgtgattggatacgtatcg
aagatcaacgataaagacgtggaccgcctggacaaagacggcaaactggctaactacgct
gcgacgcatgatattggtaagctcggtattgaacgttactatgaagacgtactgcatggg
cagaccggctatgaagaagttgaagtcaacaaccgcggtcgtgtcattcgtcagttgaaa
gaggtcgcgccgcaggccgggcatgatatttacctcacgttggatttgaagctccagcag
tatattgaaacgctgctggcgggtagccgcgccgccgtggtggtcaccgacccgcgtacc
ggtggcgttctggcgctggtctccatgccaagctacgacccgaacctgtttgtggatggc
atctccagtaaagattactccgggttgctcaatgatccgaataccccattggttaaccgc
gccacgcaaggcgtttatcctccggcgtcgacggttaagccttacgtggcggtttctgcg
ttaagcgcgggcgtcatcacccgcaataccggtctgttcgatccgggctggtggcagtta
cccggctctgagaaacgttaccgcgactggaaaaaatggggtcacggccacctgaacatt
acccgctccctggaagagtccgcggatacgtttttctatcagatcgcctatgatatgggg
atagaccggctttccgagtggatgagcaagtttggctatggccaatatacgggtatcgat
cttgccgaagaacgttccgggaacatgccaacccgtgaatggaagcaaaaacggtttaaa
aagccgtggtaccagggtgataccattccggtcggcatcggtcagggttactggacggca
acccctatccagatgagtaaagcgctgatgatccttatcaacgacggtttggtaaaagtc
ccgcatctactgatgagcacggcagaaaatggcaagcaagtgccatgggttcagccgcac
gaaccgcccgttggcgatattcattccggttactgggaaatcgccaaagacggtatgtac
ggtgtcgctaaccgccctaacgggactgcacataaatatttcgctggcgcgccttacaaa
attgcggcgaaatccggtaccgcacaggtctttggcctgaaagcgaatgaaacctataac
gcgcataagatcgccgaacgtttacgtgaccacaagttaatgacggccttcgcaccctat
gataaaccccaggtcgctgtcgccatgatccttgaaaacggcggcgcgggtccggctgtg
gggacgattatgcgccagatccttgaccacattatgttgggcgacaacaacaccaatctg
cctgcggaaaacccagcggttgcagcagctgaggaccaataa
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